Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | CEP76_RS04170 | Genome accession | NZ_CP022037 |
| Coordinates | 801454..802596 (+) | Length | 380 a.a. |
| NCBI ID | WP_010945645.1 | Uniprot ID | - |
| Organism | [Haemophilus] ducreyi strain FDAARGOS_297 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 796454..807596
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEP76_RS08645 | - | 798074..798370 (+) | 297 | WP_010945650.1 | hypothetical protein | - |
| CEP76_RS04150 (CEP76_04155) | - | 798502..798792 (+) | 291 | WP_041603730.1 | DUF406 family protein | - |
| CEP76_RS04155 (CEP76_04160) | - | 799248..799580 (+) | 333 | WP_010945648.1 | multidrug efflux SMR transporter | - |
| CEP76_RS04160 (CEP76_04165) | rfaD | 799676..800617 (-) | 942 | WP_010945647.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| CEP76_RS04165 (CEP76_04170) | def | 800749..801264 (-) | 516 | WP_010945646.1 | peptide deformylase | - |
| CEP76_RS04170 (CEP76_04175) | dprA | 801454..802596 (+) | 1143 | WP_010945645.1 | DNA-processing protein DprA | Machinery gene |
| CEP76_RS04175 (CEP76_04180) | - | 802706..804715 (-) | 2010 | WP_010945644.1 | OPT family oligopeptide transporter | - |
| CEP76_RS04180 (CEP76_04185) | secE | 805005..805421 (+) | 417 | WP_010945643.1 | preprotein translocase subunit SecE | - |
| CEP76_RS04185 (CEP76_04190) | nusG | 805423..805986 (+) | 564 | WP_010945642.1 | transcription termination/antitermination protein NusG | - |
| CEP76_RS04190 (CEP76_04195) | rplK | 806174..806602 (+) | 429 | WP_005599211.1 | 50S ribosomal protein L11 | - |
| CEP76_RS04195 (CEP76_04200) | rplA | 806607..807296 (+) | 690 | WP_010945641.1 | 50S ribosomal protein L1 | - |
Sequence
Protein
Download Length: 380 a.a. Molecular weight: 42165.79 Da Isoelectric Point: 6.3418
>NTDB_id=236051 CEP76_RS04170 WP_010945645.1 801454..802596(+) (dprA) [[Haemophilus] ducreyi strain FDAARGOS_297]
MKQLALLKLLQIPQLGPQRIARLLNQIDFAEFCQYSKKELQQMGWNDKQIQCWFQPEMRWIDRAITWAEQPNQRLVTLFD
KDYPFLLQQISTAPPLLFVRGSVASLTLPQIAIVGSRDYSPYGEYWASYFTRELIEQGFAVTSGLAIGIDGFCHKQAVKQ
QAVTIAVLGSGLDQVYPARHKKLAEQIIANGGALVSEFFPDQPPLAEHFPRRNRIISGLSLGTLVVEATINSGSLITARY
ALEQGREVFALPNTAQNPYAVGCHQLIKEGAILTESIADILQAIQHQYRPSAKLVNANSMNNPPNIANQQLTIPLTDKIL
PDLTACQQQIMQNISFTPIAIDDLAKATDIAVEILLVELLGLELLGMIKQVCGGYVVTQA
MKQLALLKLLQIPQLGPQRIARLLNQIDFAEFCQYSKKELQQMGWNDKQIQCWFQPEMRWIDRAITWAEQPNQRLVTLFD
KDYPFLLQQISTAPPLLFVRGSVASLTLPQIAIVGSRDYSPYGEYWASYFTRELIEQGFAVTSGLAIGIDGFCHKQAVKQ
QAVTIAVLGSGLDQVYPARHKKLAEQIIANGGALVSEFFPDQPPLAEHFPRRNRIISGLSLGTLVVEATINSGSLITARY
ALEQGREVFALPNTAQNPYAVGCHQLIKEGAILTESIADILQAIQHQYRPSAKLVNANSMNNPPNIANQQLTIPLTDKIL
PDLTACQQQIMQNISFTPIAIDDLAKATDIAVEILLVELLGLELLGMIKQVCGGYVVTQA
Nucleotide
Download Length: 1143 bp
>NTDB_id=236051 CEP76_RS04170 WP_010945645.1 801454..802596(+) (dprA) [[Haemophilus] ducreyi strain FDAARGOS_297]
ATGAAACAATTGGCATTACTTAAATTATTGCAGATTCCACAACTAGGCCCACAGCGGATTGCGCGTTTATTAAATCAAAT
TGATTTTGCTGAATTTTGTCAATATAGCAAAAAAGAACTACAGCAAATGGGATGGAATGACAAACAAATTCAATGTTGGT
TTCAGCCTGAAATGCGTTGGATTGATCGGGCAATAACTTGGGCAGAACAGCCAAATCAACGGCTTGTGACACTGTTTGAT
AAAGATTATCCCTTTTTATTACAGCAAATTAGCACTGCACCACCATTATTATTTGTGCGTGGTTCGGTGGCTAGCTTAAC
TCTGCCACAAATTGCGATTGTTGGCAGTCGTGATTATTCTCCTTATGGAGAGTATTGGGCCTCTTATTTTACACGAGAAT
TAATTGAACAAGGTTTTGCGGTAACAAGTGGCTTGGCGATTGGCATTGATGGTTTTTGTCATAAACAAGCAGTAAAACAG
CAAGCGGTGACTATTGCTGTATTAGGTAGCGGTTTAGATCAAGTTTATCCCGCACGTCATAAAAAATTAGCAGAACAAAT
TATTGCGAATGGTGGAGCATTAGTGTCAGAGTTTTTTCCCGATCAACCCCCGCTAGCGGAACATTTTCCTCGTCGAAATC
GTATTATTAGTGGCTTGTCACTTGGTACTTTAGTGGTAGAAGCAACGATTAATAGTGGCTCATTAATTACCGCACGCTAT
GCTTTAGAGCAAGGGCGAGAGGTCTTTGCTTTGCCGAATACTGCACAAAATCCTTATGCAGTGGGTTGCCATCAATTGAT
TAAAGAAGGCGCTATTTTAACCGAGTCGATAGCGGATATTTTACAAGCGATTCAGCATCAATATCGACCATCAGCTAAGT
TAGTTAATGCAAATAGCATGAATAATCCCCCTAATATTGCTAATCAGCAATTGACAATACCGTTAACGGATAAAATATTG
CCGGATTTGACCGCTTGTCAGCAACAGATTATGCAAAATATCAGTTTTACGCCAATTGCAATAGATGATTTAGCCAAAGC
AACGGATATAGCGGTCGAAATATTATTAGTTGAGCTACTTGGTTTAGAATTATTAGGTATGATTAAACAGGTTTGTGGGG
GATATGTAGTGACACAGGCATAA
ATGAAACAATTGGCATTACTTAAATTATTGCAGATTCCACAACTAGGCCCACAGCGGATTGCGCGTTTATTAAATCAAAT
TGATTTTGCTGAATTTTGTCAATATAGCAAAAAAGAACTACAGCAAATGGGATGGAATGACAAACAAATTCAATGTTGGT
TTCAGCCTGAAATGCGTTGGATTGATCGGGCAATAACTTGGGCAGAACAGCCAAATCAACGGCTTGTGACACTGTTTGAT
AAAGATTATCCCTTTTTATTACAGCAAATTAGCACTGCACCACCATTATTATTTGTGCGTGGTTCGGTGGCTAGCTTAAC
TCTGCCACAAATTGCGATTGTTGGCAGTCGTGATTATTCTCCTTATGGAGAGTATTGGGCCTCTTATTTTACACGAGAAT
TAATTGAACAAGGTTTTGCGGTAACAAGTGGCTTGGCGATTGGCATTGATGGTTTTTGTCATAAACAAGCAGTAAAACAG
CAAGCGGTGACTATTGCTGTATTAGGTAGCGGTTTAGATCAAGTTTATCCCGCACGTCATAAAAAATTAGCAGAACAAAT
TATTGCGAATGGTGGAGCATTAGTGTCAGAGTTTTTTCCCGATCAACCCCCGCTAGCGGAACATTTTCCTCGTCGAAATC
GTATTATTAGTGGCTTGTCACTTGGTACTTTAGTGGTAGAAGCAACGATTAATAGTGGCTCATTAATTACCGCACGCTAT
GCTTTAGAGCAAGGGCGAGAGGTCTTTGCTTTGCCGAATACTGCACAAAATCCTTATGCAGTGGGTTGCCATCAATTGAT
TAAAGAAGGCGCTATTTTAACCGAGTCGATAGCGGATATTTTACAAGCGATTCAGCATCAATATCGACCATCAGCTAAGT
TAGTTAATGCAAATAGCATGAATAATCCCCCTAATATTGCTAATCAGCAATTGACAATACCGTTAACGGATAAAATATTG
CCGGATTTGACCGCTTGTCAGCAACAGATTATGCAAAATATCAGTTTTACGCCAATTGCAATAGATGATTTAGCCAAAGC
AACGGATATAGCGGTCGAAATATTATTAGTTGAGCTACTTGGTTTAGAATTATTAGGTATGATTAAACAGGTTTGTGGGG
GATATGTAGTGACACAGGCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Glaesserella parasuis strain SC1401 |
68.365 |
98.158 |
0.671 |
| dprA | Vibrio campbellii strain DS40M4 |
45.479 |
98.947 |
0.45 |
| dprA | Haemophilus influenzae Rd KW20 |
49.563 |
90.263 |
0.447 |
| dprA | Vibrio cholerae strain A1552 |
42.4 |
98.684 |
0.418 |
| dprA | Legionella pneumophila strain ERS1305867 |
38.564 |
98.947 |
0.382 |