Detailed information NTG0023601

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: TRNA_RS40160
• Genome accession: NC_006270
• Coordinates: 3611583..3612740 (-)
• Length: 385 a.a.
• NCBI ID: WP_003185733.1
• Uniprot ID: -
• Organism: Bacillus licheniformis DSM 13 = ATCC 14580
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3606583..3617740

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TRNA_RS40130 (BL03366)	-	3606827..3607246 (-)	420	WP_003185715.1	TIGR03826 family flagellar region protein	-
TRNA_RS40135 (BL03365)	comFC	3607305..3608039 (-)	735	WP_011198352.1	amidophosphoribosyltransferase	Machinery gene
TRNA_RS40140 (BL03364)	-	3607996..3608280 (-)	285	WP_003185718.1	late competence development ComFB family protein	-
TRNA_RS40145 (BL03363)	comFA	3608335..3609729 (-)	1395	WP_003185720.1	DEAD/DEAH box helicase	Machinery gene
TRNA_RS40150 (BL03362)	-	3609850..3610692 (-)	843	WP_003185726.1	DegV family protein	-
TRNA_RS40155 (BL03361)	degU	3610812..3611501 (-)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
TRNA_RS40160 (BL03360)	degS	3611583..3612740 (-)	1158	WP_003185733.1	sensor histidine kinase	Regulator
TRNA_RS40165 (BL03593)	-	3612954..3613592 (+)	639	WP_011198353.1	YigZ family protein	-
TRNA_RS40170 (BL03592)	-	3613607..3614683 (+)	1077	WP_003185737.1	LCP family protein	-
TRNA_RS40175 (BL03359)	-	3614768..3615142 (-)	375	WP_003185738.1	YunG family protein	-
TRNA_RS40180 (BL03358)	-	3615262..3616326 (-)	1065	WP_003185739.1	glycosyltransferase family 4 protein	-
TRNA_RS40185 (BL03357)	tuaH	3616457..3617638 (-)	1182	WP_011198354.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44636.36 Da
• Isoelectric Point: 6.7863

>NTDB_id=23601 TRNA_RS40160 WP_003185733.1 3611583..3612740(-) (degS) [Bacillus licheniformis DSM 13 = ATCC 14580]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEERRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=23601 TRNA_RS40160 WP_003185733.1 3611583..3612740(-) (degS) [Bacillus licheniformis DSM 13 = ATCC 14580]
GTGAGCGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGACGGGAGCAAGGA
TGAAGTCTTTCAAATCGGAGAGCAGTCCCGCCAGCAATACGAAGGCTTGGTAGAAGAGCTGAAACAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGGAACCGCTTGTCAGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACAATGAT
CCAGCAGCGGGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGTCAGATTACCGTCGTCTTAAACTACTTAAATCAGGATCTGCGCCAGGTCGGCGTTCTCCTT
GAAGATGCGCAGGCCAAGCAGGATTTCGGACTGCGGATTATCGAAGCCCAGGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATTCACGACGGTCCTGCGCAAATGCTGGCCAACGTTATGATGAGATCTGAACTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGGCCGATGGCTTTAGACGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATTCATTTCCAATGCATCGGAGAATCCGAAGAAAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TATTCCGGCTTGCACAGGAAGCGGTGACAAACGCCTTAAAACACTCCGAATCAACTGAAATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGCTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTAAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGCTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATATTGATTAAAGTTCCACTGTCTTTGTAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (292-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	89.351	100	0.894