Detailed information NTG0235875

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CEP49_RS06325
• Genome accession: NZ_CP022012
• Coordinates: 1398400..1399584 (-)
• Length: 394 a.a.
• NCBI ID: WP_265473827.1
• Uniprot ID: -
• Organism: Mergibacter septicus strain 16309-1-I1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1393400..1404584

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CEP49_RS06310 (CEP49_06260)	rluA	1393744..1394403 (-)	660	WP_265473825.1	bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	-
CEP49_RS06315 (CEP49_06265)	rapA	1394406..1397321 (-)	2916	WP_265473826.1	RNA polymerase-associated protein RapA	-
CEP49_RS06320 (CEP49_06270)	pnuC	1397591..1398290 (+)	700	Protein_1221	nicotinamide riboside transporter PnuC	-
CEP49_RS06325 (CEP49_06275)	dprA	1398400..1399584 (-)	1185	WP_265473827.1	DNA-processing protein DprA	Machinery gene
CEP49_RS06330 (CEP49_06280)	def	1399824..1400339 (+)	516	WP_265473828.1	peptide deformylase	-
CEP49_RS06335 (CEP49_06285)	fmt	1400375..1401331 (+)	957	WP_265473829.1	methionyl-tRNA formyltransferase	-
CEP49_RS06340 (CEP49_06290)	rsmB	1401343..1402755 (+)	1413	WP_409240663.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
CEP49_RS06345 (CEP49_06295)	trkA	1402777..1404153 (+)	1377	WP_261920052.1	Trk system potassium transporter TrkA	-

Sequence

Protein

• Length: 394 a.a.
• Molecular weight: 43718.53 Da
• Isoelectric Point: 6.5722

>NTDB_id=235875 CEP49_RS06325 WP_265473827.1 1398400..1399584(-) (dprA) [Mergibacter septicus strain 16309-1-I1]
MYDLAELLRLSLVPQIGVVKIQQLLAQISLSELSCYSAKELQQIGWKENQIHAWLKPKQAIIDKTLEWQQQPQQHILTIF
DPIYPPLLKQIPAPPPLLYIKGNLESLNTAQIAMVGSRHCSRYGEQLAIQFATELTQHKLTITSGLAIGIDSLSHQATLQ
TQGVTIAVLGNGLNRIYPYRHQKLAQQIIEQGGALVSELLPNIPPIAENFPRRNRIISGLTLGTLVVEATEKSGSLITAR
YALEQNREVFAIPGALYNGHSQGCHQLIKQGAWLVENVKDILDILSSQFLHDYLHQSLLEQNFTDTLRPSSLEDLKTAPI
SNLNSPKAPSSPPIGPQIPPEYLTLYQHLSTTPIPPDDLATNLKITIPELLPALLELELQGVIKQVEGGYVKLF

Nucleotide

• Length: 1185 bp

>NTDB_id=235875 CEP49_RS06325 WP_265473827.1 1398400..1399584(-) (dprA) [Mergibacter septicus strain 16309-1-I1]
ATGTACGATTTAGCGGAACTGTTACGCCTTAGTCTAGTACCACAAATAGGCGTGGTAAAAATCCAACAACTTTTAGCACA
AATCTCATTATCAGAATTATCTTGCTATTCAGCCAAAGAATTACAACAAATAGGTTGGAAAGAAAATCAAATTCACGCTT
GGCTGAAGCCTAAGCAAGCGATCATTGATAAAACATTAGAATGGCAACAACAACCGCAACAACATATTCTGACGATTTTT
GATCCTATTTATCCCCCTTTATTAAAACAAATTCCAGCACCACCGCCCCTTCTTTATATCAAAGGAAATCTTGAGAGTCT
GAATACCGCCCAGATTGCAATGGTGGGCAGCCGCCACTGTTCTCGTTATGGTGAACAACTTGCCATTCAATTTGCCACTG
AACTAACCCAGCATAAGTTAACCATTACCAGTGGTTTAGCCATTGGTATTGATAGCCTTAGCCATCAAGCCACTTTACAA
ACTCAGGGCGTTACCATTGCTGTATTAGGCAATGGATTAAACCGAATCTACCCATATCGGCATCAAAAACTAGCCCAACA
AATTATTGAACAAGGAGGAGCATTAGTATCAGAATTACTCCCAAACATACCACCTATTGCCGAAAATTTTCCTCGCCGTA
ATCGGATTATCAGTGGCCTTACACTCGGTACATTAGTGGTTGAAGCGACAGAAAAAAGTGGTTCTCTTATCACTGCTCGT
TATGCGTTAGAACAAAATAGAGAGGTATTTGCCATTCCCGGGGCTTTATATAATGGTCACAGTCAAGGGTGCCATCAATT
AATTAAACAAGGAGCTTGGTTAGTCGAAAATGTGAAAGATATTTTAGATATTCTTTCTTCCCAATTTTTACACGATTATC
TTCATCAATCGCTACTTGAACAAAATTTTACTGATACTCTCCGTCCATCATCTCTGGAAGACCTAAAAACAGCCCCTATT
TCCAATCTTAATAGCCCAAAAGCTCCCTCATCACCACCCATAGGACCACAAATACCACCCGAATATCTCACGCTTTATCA
ACATCTTAGCACCACGCCAATACCGCCAGATGACCTTGCTACAAATCTTAAAATTACAATCCCAGAGTTATTACCCGCAC
TGCTAGAACTTGAGTTACAAGGGGTCATTAAACAAGTCGAGGGAGGGTATGTGAAACTATTTTAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (335-389)

• DNA recombination-mediator protein A (DNA_processg_A) (71-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	50.895	99.239	0.505
dprA	Haemophilus influenzae Rd KW20	53.672	89.848	0.482
dprA	Vibrio campbellii strain DS40M4	45.78	99.239	0.454
dprA	Vibrio cholerae strain A1552	42.967	99.239	0.426
dprA	Legionella pneumophila strain ERS1305867	40.554	100	0.409