Detailed information NTG0235836

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CEP45_RS07220
• Genome accession: NZ_CP022010
• Coordinates: 1598040..1599224 (-)
• Length: 394 a.a.
• NCBI ID: WP_265490544.1
• Uniprot ID: -
• Organism: Mergibacter septicus strain 27643-20-I1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1593040..1604224

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CEP45_RS07205 (CEP45_07170)	rluA	1593388..1594047 (-)	660	WP_261920058.1	bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	-
CEP45_RS07210 (CEP45_07175)	rapA	1594050..1596965 (-)	2916	WP_265490542.1	RNA polymerase-associated protein RapA	-
CEP45_RS07215 (CEP45_07180)	pnuC	1597235..1597951 (+)	717	WP_265490543.1	nicotinamide riboside transporter PnuC	-
CEP45_RS07220 (CEP45_07185)	dprA	1598040..1599224 (-)	1185	WP_265490544.1	DNA-processing protein DprA	Machinery gene
CEP45_RS07225 (CEP45_07190)	def	1599464..1599979 (+)	516	WP_261920054.1	peptide deformylase	-
CEP45_RS07230 (CEP45_07195)	fmt	1600015..1600971 (+)	957	WP_265490545.1	methionyl-tRNA formyltransferase	-
CEP45_RS07235 (CEP45_07200)	rsmB	1600983..1602395 (+)	1413	WP_265490546.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
CEP45_RS07240 (CEP45_07205)	trkA	1602417..1603793 (+)	1377	WP_261920052.1	Trk system potassium transporter TrkA	-

Sequence

Protein

• Length: 394 a.a.
• Molecular weight: 43674.44 Da
• Isoelectric Point: 6.4265

>NTDB_id=235836 CEP45_RS07220 WP_265490544.1 1598040..1599224(-) (dprA) [Mergibacter septicus strain 27643-20-I1]
MYDLAELLRLSLVPQIGVVKIQQLLAQISLSELSCYSAKELQQIGWKENQIHAWLKPKQAIIDKTLEWQQQPQQHILTIF
DPIYPPLLKQIPAPPPLLYIKGNLESLNTAQIAMVGSRHCSRYGEQLAIQFATELTQHNLTITSGLAIGIDSLSHQATLQ
AQGVTIAVLGNGLNRIYPYRHQKLAQQIIEQGGALVSELLPNIPPIAENFPRRNRIISGLTLGTLVVEATEKSGSLITAR
YALEQNREVFAIPGALYNGHSQGCHQLIKQGAWLVENVKDILDILSSQFLHDYLHQSLLEQNFTDTLRPSSLGDLKTAPI
SNLNSPKAPSSPPIEPQIPPEYLTLYQHLSTTPIPPDDLATNLKITIPELLPALLELELQGVIKQVEGGYVKLF

Nucleotide

• Length: 1185 bp

>NTDB_id=235836 CEP45_RS07220 WP_265490544.1 1598040..1599224(-) (dprA) [Mergibacter septicus strain 27643-20-I1]
ATGTACGATTTAGCGGAACTGTTACGCCTTAGTCTAGTACCACAAATAGGCGTGGTAAAAATCCAACAACTTTTAGCACA
AATCTCATTATCAGAATTATCTTGCTATTCAGCCAAAGAATTACAACAAATAGGTTGGAAAGAAAATCAAATTCACGCTT
GGCTGAAGCCTAAGCAAGCGATCATTGATAAAACATTAGAATGGCAACAACAACCGCAACAACATATTCTGACGATTTTT
GATCCTATTTATCCCCCTTTATTAAAACAAATTCCAGCACCACCGCCCCTTCTTTATATCAAAGGAAATCTTGAGAGTCT
GAATACCGCCCAGATTGCAATGGTGGGCAGTCGCCACTGTTCTCGTTATGGTGAACAACTTGCCATTCAATTTGCCACTG
AACTAACCCAGCATAACTTAACCATTACCAGTGGTTTAGCCATTGGTATTGATAGCCTTAGCCATCAAGCCACTTTACAA
GCTCAGGGCGTTACCATTGCTGTATTAGGCAATGGATTAAACCGAATCTACCCATATCGGCATCAAAAACTAGCCCAACA
AATTATTGAACAAGGAGGAGCATTAGTATCAGAATTACTCCCAAACATACCACCTATTGCCGAAAATTTTCCTCGCCGTA
ATCGGATTATCAGTGGCCTTACACTCGGTACATTAGTGGTTGAAGCGACAGAAAAAAGTGGTTCTCTTATCACTGCTCGT
TATGCGTTAGAACAAAATAGAGAGGTATTTGCCATTCCCGGGGCTTTATATAATGGTCACAGTCAAGGGTGCCATCAATT
AATTAAACAAGGAGCTTGGTTAGTCGAAAATGTGAAAGATATTTTAGATATTCTTTCTTCCCAATTTTTACACGATTATC
TTCATCAATCGCTACTTGAACAAAATTTTACTGATACTCTCCGTCCATCATCTCTGGGAGACCTAAAAACAGCCCCTATT
TCCAATCTTAATAGCCCAAAAGCTCCCTCATCACCACCCATAGAACCACAAATACCACCCGAATATCTCACGCTTTATCA
ACATCTTAGCACCACGCCAATACCGCCAGATGACCTTGCTACAAATCTTAAAATTACAATCCCAGAGTTATTACCCGCAC
TGCTAGAACTTGAGTTACAAGGGGTCATTAAACAAGTCGAGGGAGGGTATGTGAAACTATTTTAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (331-389)

• DNA recombination-mediator protein A (DNA_processg_A) (71-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	50.384	99.239	0.5
dprA	Haemophilus influenzae Rd KW20	53.672	89.848	0.482
dprA	Vibrio campbellii strain DS40M4	46.292	99.239	0.459
dprA	Vibrio cholerae strain A1552	43.622	99.492	0.434
dprA	Legionella pneumophila strain ERS1305867	40.554	100	0.409