Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | CCZ24_RS01275 | Genome accession | NZ_CP021773 |
| Coordinates | 248742..249233 (+) | Length | 163 a.a. |
| NCBI ID | WP_000609585.1 | Uniprot ID | A0AAV3JH34 |
| Organism | Streptococcus agalactiae strain B105 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 243742..254233
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCZ24_RS01250 (CCZ24_01230) | - | 244515..245015 (+) | 501 | WP_000446812.1 | phosphatase PAP2 family protein | - |
| CCZ24_RS01255 (CCZ24_01235) | trxA | 245096..245410 (+) | 315 | WP_001162959.1 | thioredoxin | - |
| CCZ24_RS01260 (CCZ24_01240) | - | 245456..246049 (-) | 594 | WP_000402394.1 | helix-turn-helix transcriptional regulator | - |
| CCZ24_RS01265 (CCZ24_01245) | mutY | 246226..247379 (-) | 1154 | Protein_236 | A/G-specific adenine glycosylase | - |
| CCZ24_RS01270 (CCZ24_01250) | rpsF | 248443..248730 (+) | 288 | WP_001151773.1 | 30S ribosomal protein S6 | - |
| CCZ24_RS01275 (CCZ24_01255) | ssbA | 248742..249233 (+) | 492 | WP_000609585.1 | single-stranded DNA-binding protein | Machinery gene |
| CCZ24_RS01280 (CCZ24_01260) | rpsR | 249278..249517 (+) | 240 | WP_000068665.1 | 30S ribosomal protein S18 | - |
| CCZ24_RS01285 (CCZ24_01265) | - | 249687..250631 (+) | 945 | WP_000812120.1 | magnesium transporter CorA family protein | - |
| CCZ24_RS01290 (CCZ24_01270) | - | 250656..251327 (+) | 672 | WP_000174846.1 | DUF1129 family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 18165.81 Da Isoelectric Point: 4.9119
>NTDB_id=233331 CCZ24_RS01275 WP_000609585.1 248742..249233(+) (ssbA) [Streptococcus agalactiae strain B105]
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVAESFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDD
LPF
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVAESFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=233331 CCZ24_RS01275 WP_000609585.1 248742..249233(+) (ssbA) [Streptococcus agalactiae strain B105]
ATGATTAATAATGTAGTACTTGTAGGTCGCATGACCCGTGATGCAGAACTTCGTTATACACCAAGTAATCAAGCGGTAGC
CACTTTTTCACTTGCAGTTAATCGTAATTTTAAAAATCAATCTGGCGAACGTGAGGCTGATTTTATTAACTGTGTTATTT
GGCGCCAACAAGCTGAAAACTTGGCTAACTGGGCAAAAAAAGGTGCTTTGGTTGGAATTACAGGTCGTATCCAAACGCGT
AATTATGAAAACCAACAAGGTCAACGTGTCTATGTAACAGAAGTTGTTGCGGAAAGTTTCCAATTATTGGAAAGTCGTGC
TACACGAGAAGGTGGTTCACCTAACTCTTATAATAACGGTGGCTATAACAATGCTCCGTCAAATAATAGTTATTCAGCTT
CTTCTCAACAAACACCTAATTTTAGTCGTGATGAGAGTCCGTTTGGTAACTCAAATCCAATGGATATTTCAGATGATGAT
CTACCATTCTAA
ATGATTAATAATGTAGTACTTGTAGGTCGCATGACCCGTGATGCAGAACTTCGTTATACACCAAGTAATCAAGCGGTAGC
CACTTTTTCACTTGCAGTTAATCGTAATTTTAAAAATCAATCTGGCGAACGTGAGGCTGATTTTATTAACTGTGTTATTT
GGCGCCAACAAGCTGAAAACTTGGCTAACTGGGCAAAAAAAGGTGCTTTGGTTGGAATTACAGGTCGTATCCAAACGCGT
AATTATGAAAACCAACAAGGTCAACGTGTCTATGTAACAGAAGTTGTTGCGGAAAGTTTCCAATTATTGGAAAGTCGTGC
TACACGAGAAGGTGGTTCACCTAACTCTTATAATAACGGTGGCTATAACAATGCTCCGTCAAATAATAGTTATTCAGCTT
CTTCTCAACAAACACCTAATTTTAGTCGTGATGAGAGTCCGTTTGGTAACTCAAATCCAATGGATATTTCAGATGATGAT
CTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.714 |
100 |
0.62 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.064 |
100 |
0.62 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
55.963 |
66.871 |
0.374 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
56.604 |
65.031 |
0.368 |