Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | CDH85_RS05610 | Genome accession | NZ_CP021769 |
| Coordinates | 1012987..1013577 (+) | Length | 196 a.a. |
| NCBI ID | WP_000613483.1 | Uniprot ID | A0AAV3JHA0 |
| Organism | Streptococcus agalactiae strain B509 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1007987..1018577
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDH85_RS05590 (CDH85_05555) | - | 1008745..1010097 (+) | 1353 | WP_000427463.1 | APC family permease | - |
| CDH85_RS05595 (CDH85_05560) | - | 1010270..1010818 (+) | 549 | WP_001019793.1 | tRNA (cytidine(34)-2'-O)-methyltransferase | - |
| CDH85_RS05600 (CDH85_05565) | - | 1010954..1012123 (+) | 1170 | WP_000634087.1 | MalY/PatB family protein | - |
| CDH85_RS05605 (CDH85_05570) | upp | 1012233..1012862 (+) | 630 | WP_000514490.1 | uracil phosphoribosyltransferase | - |
| CDH85_RS05610 (CDH85_05575) | clpP | 1012987..1013577 (+) | 591 | WP_000613483.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| CDH85_RS05615 (CDH85_05580) | - | 1013677..1013922 (+) | 246 | WP_001041186.1 | DUF2129 domain-containing protein | - |
| CDH85_RS05620 (CDH85_05585) | - | 1014077..1015243 (+) | 1167 | WP_000415515.1 | ABC transporter substrate-binding protein | - |
| CDH85_RS05625 (CDH85_05590) | - | 1015349..1016218 (+) | 870 | WP_000941400.1 | branched-chain amino acid ABC transporter permease | - |
| CDH85_RS05630 (CDH85_05595) | - | 1016221..1017174 (+) | 954 | WP_000662323.1 | branched-chain amino acid ABC transporter permease | - |
| CDH85_RS05635 (CDH85_05600) | - | 1017175..1017999 (+) | 825 | WP_112435783.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21550.52 Da Isoelectric Point: 4.5933
>NTDB_id=233155 CDH85_RS05610 WP_000613483.1 1012987..1013577(+) (clpP) [Streptococcus agalactiae strain B509]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGQVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQSDMAIAAEHLLKTRHTLEKILADNSGQ
SIEKVHDDAERDRWMSAQETLDYGFIDAIMENNNLQ
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGQVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQSDMAIAAEHLLKTRHTLEKILADNSGQ
SIEKVHDDAERDRWMSAQETLDYGFIDAIMENNNLQ
Nucleotide
Download Length: 591 bp
>NTDB_id=233155 CDH85_RS05610 WP_000613483.1 1012987..1013577(+) (clpP) [Streptococcus agalactiae strain B509]
ATGATTCCAGTAGTTATTGAACAAACAAGTCGTGGTGAACGTTCTTATGATATTTACTCACGTCTTTTAAAAGATCGTAT
TATTATGTTGACAGGCCAAGTTGAGGATAATATGGCCAATAGTATCATTGCACAGTTATTGTTTCTCGATGCACAAGATA
ATACAAAGGATATTTACCTTTATGTCAATACACCAGGTGGTTCAGTATCGGCTGGACTTGCTATTGTGGACACCATGAAC
TTCATTAAATCGGACGTACAGACGATTGTTATGGGGATGGCTGCTTCGATGGGAACCATTATTGCTTCAAGTGGTGCTAA
AGGAAAACGTTTTATGTTACCGAATGCAGAATATATGATCCACCAACCAATGGGCGGAACAGGCGGAGGTACACAGCAAT
CTGATATGGCTATCGCTGCTGAGCATCTTTTAAAAACGCGTCATACTTTAGAAAAAATCTTAGCTGATAATTCTGGTCAA
TCTATTGAAAAAGTCCATGATGATGCAGAGCGTGATCGTTGGATGAGTGCTCAAGAAACACTTGATTATGGCTTTATTGA
TGCTATTATGGAAAATAATAATTTACAATAA
ATGATTCCAGTAGTTATTGAACAAACAAGTCGTGGTGAACGTTCTTATGATATTTACTCACGTCTTTTAAAAGATCGTAT
TATTATGTTGACAGGCCAAGTTGAGGATAATATGGCCAATAGTATCATTGCACAGTTATTGTTTCTCGATGCACAAGATA
ATACAAAGGATATTTACCTTTATGTCAATACACCAGGTGGTTCAGTATCGGCTGGACTTGCTATTGTGGACACCATGAAC
TTCATTAAATCGGACGTACAGACGATTGTTATGGGGATGGCTGCTTCGATGGGAACCATTATTGCTTCAAGTGGTGCTAA
AGGAAAACGTTTTATGTTACCGAATGCAGAATATATGATCCACCAACCAATGGGCGGAACAGGCGGAGGTACACAGCAAT
CTGATATGGCTATCGCTGCTGAGCATCTTTTAAAAACGCGTCATACTTTAGAAAAAATCTTAGCTGATAATTCTGGTCAA
TCTATTGAAAAAGTCCATGATGATGCAGAGCGTGATCGTTGGATGAGTGCTCAAGAAACACTTGATTATGGCTTTATTGA
TGCTATTATGGAAAATAATAATTTACAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
92.347 |
100 |
0.923 |
| clpP | Streptococcus thermophilus LMD-9 |
92.347 |
100 |
0.923 |
| clpP | Streptococcus pneumoniae Rx1 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae D39 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae R6 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae TIGR4 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pyogenes JRS4 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus pyogenes MGAS315 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus mutans UA159 |
88.776 |
100 |
0.888 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
85.204 |
100 |
0.852 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
84.694 |
100 |
0.847 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.031 |
98.469 |
0.571 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
57.895 |
96.939 |
0.561 |