Detailed information
Bioinformatically predicted
Overview
| Name | pilX | Type | Machinery gene |
| Locus tag | CCD84_RS03115 | Genome accession | NZ_CP021520 |
| Coordinates | 532839..533312 (+) | Length | 157 a.a. |
| NCBI ID | WP_002230430.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain 11-7 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 527839..538312
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCD84_RS03090 (CCD84_03095) | dnaB | 528286..529692 (+) | 1407 | WP_002219448.1 | replicative DNA helicase | - |
| CCD84_RS03095 (CCD84_03100) | pilH | 529994..530662 (+) | 669 | WP_002259882.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| CCD84_RS03100 (CCD84_03105) | pilV | 530692..531312 (+) | 621 | WP_149323756.1 | type IV pilus modification protein PilV | Machinery gene |
| CCD84_RS03105 (CCD84_03110) | pilJ | 531309..532262 (+) | 954 | WP_002259883.1 | PilW family protein | Machinery gene |
| CCD84_RS03110 (CCD84_03115) | pilK | 532241..532834 (+) | 594 | WP_002229321.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| CCD84_RS03115 (CCD84_03120) | pilX | 532839..533312 (+) | 474 | WP_002230430.1 | PilX family type IV pilin | Machinery gene |
| CCD84_RS03130 (CCD84_03150) | - | 535017..535442 (-) | 426 | Protein_526 | AzlC family ABC transporter permease | - |
| CCD84_RS03135 (CCD84_03155) | dut | 535584..536036 (+) | 453 | WP_002229326.1 | dUTP diphosphatase | - |
| CCD84_RS03140 (CCD84_03160) | dapC | 536113..537300 (+) | 1188 | WP_002259885.1 | succinyldiaminopimelate transaminase | - |
| CCD84_RS03145 (CCD84_03165) | yaaA | 537463..538242 (+) | 780 | WP_002229325.1 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 17472.18 Da Isoelectric Point: 9.1946
>NTDB_id=231681 CCD84_RS03115 WP_002230430.1 532839..533312(+) (pilX) [Neisseria meningitidis strain 11-7]
MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNISKQFILKNPLDDNQTIKSKLEIFVSGYKM
NPKIAEKYNVSVHFVNKEKPRAYSLVGVPKTGTGYTLSVWMNSVGDGYKCRDAASAQAHLETLSSDAGCEAFSNRKK
MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNISKQFILKNPLDDNQTIKSKLEIFVSGYKM
NPKIAEKYNVSVHFVNKEKPRAYSLVGVPKTGTGYTLSVWMNSVGDGYKCRDAASAQAHLETLSSDAGCEAFSNRKK
Nucleotide
Download Length: 474 bp
>NTDB_id=231681 CCD84_RS03115 WP_002230430.1 532839..533312(+) (pilX) [Neisseria meningitidis strain 11-7]
ATGGAACAAAAAGGGTTTACATTGATTGAGATGATGATAGTCGTCGCGATACTCGGCATTATCAGCGTCATTGCCATACC
TTCTTATCAAAGTTATATTGAAAAAGGCTATCAGTCCCAGCTTTATACGGAGATGGTCGGTATCAACAATATTTCCAAAC
AGTTTATTTTGAAAAATCCCCTGGACGATAATCAGACCATCAAGAGCAAACTGGAAATATTTGTCTCAGGCTATAAGATG
AATCCGAAAATTGCCGAAAAATATAATGTTTCGGTGCATTTTGTCAATAAGGAAAAACCAAGGGCATACAGCTTGGTCGG
CGTTCCAAAGACGGGGACGGGTTATACTTTGTCGGTATGGATGAACAGCGTGGGCGACGGATACAAATGCCGTGATGCCG
CTTCTGCCCAAGCCCATTTGGAGACCTTGTCCTCAGATGCCGGCTGTGAAGCCTTCTCTAATCGTAAAAAATAA
ATGGAACAAAAAGGGTTTACATTGATTGAGATGATGATAGTCGTCGCGATACTCGGCATTATCAGCGTCATTGCCATACC
TTCTTATCAAAGTTATATTGAAAAAGGCTATCAGTCCCAGCTTTATACGGAGATGGTCGGTATCAACAATATTTCCAAAC
AGTTTATTTTGAAAAATCCCCTGGACGATAATCAGACCATCAAGAGCAAACTGGAAATATTTGTCTCAGGCTATAAGATG
AATCCGAAAATTGCCGAAAAATATAATGTTTCGGTGCATTTTGTCAATAAGGAAAAACCAAGGGCATACAGCTTGGTCGG
CGTTCCAAAGACGGGGACGGGTTATACTTTGTCGGTATGGATGAACAGCGTGGGCGACGGATACAAATGCCGTGATGCCG
CTTCTGCCCAAGCCCATTTGGAGACCTTGTCCTCAGATGCCGGCTGTGAAGCCTTCTCTAATCGTAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilX | Neisseria meningitidis 8013 |
98.089 |
100 |
0.981 |
| pilL | Neisseria gonorrhoeae MS11 |
87.261 |
100 |
0.873 |