Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | CBR65_RS22570 | Genome accession | NZ_CP021382 |
| Coordinates | 649146..649457 (+) | Length | 103 a.a. |
| NCBI ID | WP_087465467.1 | Uniprot ID | A0A1Y0FTL7 |
| Organism | Cellvibrio sp. PSBB006 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 644146..654457
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CBR65_RS02975 (CBR65_02975) | pheA | 644188..645297 (+) | 1110 | WP_087465463.1 | prephenate dehydratase | - |
| CBR65_RS02980 (CBR65_02980) | - | 645305..646294 (+) | 990 | WP_087465464.1 | prephenate dehydrogenase/arogenate dehydrogenase family protein | - |
| CBR65_RS02985 (CBR65_02985) | cysD | 646509..647417 (+) | 909 | WP_087465465.1 | sulfate adenylyltransferase subunit CysD | - |
| CBR65_RS02990 (CBR65_02990) | cysN | 647541..648959 (+) | 1419 | WP_087465466.1 | sulfate adenylyltransferase subunit CysN | - |
| CBR65_RS22570 (CBR65_02995) | comE1/comEA | 649146..649457 (+) | 312 | WP_087465467.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| CBR65_RS03000 (CBR65_03000) | pyrF | 649568..650272 (+) | 705 | WP_198300946.1 | orotidine-5'-phosphate decarboxylase | - |
| CBR65_RS03005 (CBR65_03005) | cmk | 650303..650980 (+) | 678 | WP_087468905.1 | (d)CMP kinase | - |
| CBR65_RS03010 (CBR65_03010) | - | 651115..652464 (+) | 1350 | WP_087465469.1 | phosphomannomutase | - |
| CBR65_RS03015 (CBR65_03015) | galU | 652525..653418 (+) | 894 | WP_087465470.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 10786.40 Da Isoelectric Point: 6.2616
>NTDB_id=230338 CBR65_RS22570 WP_087465467.1 649146..649457(+) (comE1/comEA) [Cellvibrio sp. PSBB006]
MKAFVSCVFAAALVLLSSSFALAVENKPAQKAAEASQLQQAVNINTADADTLSTLKGIGAKKAEAIIAWREANGGFTSVE
QLLEVKGIGVAILDANRDNLRLQ
MKAFVSCVFAAALVLLSSSFALAVENKPAQKAAEASQLQQAVNINTADADTLSTLKGIGAKKAEAIIAWREANGGFTSVE
QLLEVKGIGVAILDANRDNLRLQ
Nucleotide
Download Length: 312 bp
>NTDB_id=230338 CBR65_RS22570 WP_087465467.1 649146..649457(+) (comE1/comEA) [Cellvibrio sp. PSBB006]
ATGAAAGCGTTTGTCTCCTGTGTTTTTGCTGCTGCACTTGTTCTCCTTTCCTCTTCCTTTGCTCTGGCTGTAGAAAATAA
ACCTGCTCAAAAGGCAGCGGAAGCTTCTCAGCTGCAACAAGCTGTCAATATCAATACGGCGGACGCTGATACCCTATCAA
CTCTGAAAGGGATTGGTGCGAAAAAGGCGGAGGCCATTATTGCGTGGCGTGAGGCTAATGGAGGGTTTACTTCAGTAGAG
CAACTGTTGGAAGTTAAAGGTATTGGCGTCGCGATTCTGGATGCGAACCGCGATAATCTCCGCCTCCAGTAA
ATGAAAGCGTTTGTCTCCTGTGTTTTTGCTGCTGCACTTGTTCTCCTTTCCTCTTCCTTTGCTCTGGCTGTAGAAAATAA
ACCTGCTCAAAAGGCAGCGGAAGCTTCTCAGCTGCAACAAGCTGTCAATATCAATACGGCGGACGCTGATACCCTATCAA
CTCTGAAAGGGATTGGTGCGAAAAAGGCGGAGGCCATTATTGCGTGGCGTGAGGCTAATGGAGGGTTTACTTCAGTAGAG
CAACTGTTGGAAGTTAAAGGTATTGGCGTCGCGATTCTGGATGCGAACCGCGATAATCTCCGCCTCCAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
46.364 |
100 |
0.495 |
| comEA | Legionella pneumophila str. Paris |
44.118 |
99.029 |
0.437 |
| comEA | Legionella pneumophila strain ERS1305867 |
44.118 |
99.029 |
0.437 |
| comEA | Vibrio cholerae C6706 |
52.055 |
70.874 |
0.369 |
| comEA | Vibrio cholerae strain A1552 |
52.055 |
70.874 |
0.369 |