Detailed information NTG0230035

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: AB895_RS05680
• Genome accession: NZ_CP021342
• Coordinates: 1186937..1187419 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046423.1
• Uniprot ID: A0A9E9MD39
• Organism: Acinetobacter baumannii strain B8342
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1181937..1192419

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB895_RS05645 (AB895_1146)	-	1182047..1183078 (+)	1032	WP_001189457.1	lipase secretion chaperone	-
AB895_RS05650 (AB895_1147)	-	1183193..1184134 (+)	942	WP_086321537.1	triacylglycerol lipase	-
AB895_RS05655 (AB895_1148)	rplS	1184187..1184555 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
AB895_RS05660 (AB895_1149)	trmD	1184763..1185503 (-)	741	WP_000464599.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
AB895_RS05665 (AB895_1150)	rimM	1185549..1186097 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
AB895_RS05670 (AB895_1151)	rpsP	1186117..1186368 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
AB895_RS05675 (AB895_1152)	pilE	1186515..1186940 (-)	426	WP_000788337.1	type IV pilin protein	Machinery gene
AB895_RS05680 (AB895_1153)	pilY2	1186937..1187419 (-)	483	WP_001046423.1	type IV pilin protein	Machinery gene
AB895_RS05685 (AB895_1154)	pilY1	1187432..1191286 (-)	3855	WP_000768954.1	PilC/PilY family type IV pilus protein	Machinery gene
AB895_RS05690 (AB895_1155)	pilX	1191298..1192116 (-)	819	WP_000149376.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17575.84 Da
• Isoelectric Point: 8.4834

>NTDB_id=230035 AB895_RS05680 WP_001046423.1 1186937..1187419(-) (pilY2) [Acinetobacter baumannii strain B8342]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAVKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSAANGQTWVIRATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCEANSEVWQ

Nucleotide

• Length: 483 bp

>NTDB_id=230035 AB895_RS05680 WP_001046423.1 1186937..1187419(-) (pilY2) [Acinetobacter baumannii strain B8342]
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGTTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTGCTAATGGTCAAAC
ATGGGTAATTAGAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGAACGACTACTTGTAATACATGTGAAGCGAACAGTGAGGTTTGGCAG
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-127)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	93.125	100	0.931
comE	Acinetobacter baylyi ADP1	38.953	100	0.419