Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | CA922_RS04905 | Genome accession | NZ_CP021268 |
| Coordinates | 1066832..1067431 (+) | Length | 199 a.a. |
| NCBI ID | WP_011213355.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. pneumophila strain Birmingham | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1061832..1072431
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA922_RS04890 | ravI | 1063778..1064785 (-) | 1008 | WP_011946020.1 | Dot/Icm T4SS effector RavI | - |
| CA922_RS04895 | pilM | 1065202..1066266 (+) | 1065 | WP_011215094.1 | type IV pilus assembly protein PilM | Machinery gene |
| CA922_RS04900 | pilN | 1066270..1066818 (+) | 549 | WP_011213354.1 | PilN domain-containing protein | Machinery gene |
| CA922_RS04905 | pilO | 1066832..1067431 (+) | 600 | WP_011213355.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| CA922_RS04910 | pilP | 1067428..1068012 (+) | 585 | WP_011213356.1 | pilus assembly protein PilP | Machinery gene |
| CA922_RS04915 | pilQ | 1068016..1070112 (+) | 2097 | WP_027220941.1 | type IV pilus secretin PilQ | Machinery gene |
| CA922_RS04920 | aroK | 1070558..1071085 (+) | 528 | WP_010946667.1 | shikimate kinase AroK | - |
| CA922_RS04925 | aroB | 1071072..1072181 (+) | 1110 | WP_027220942.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22523.24 Da Isoelectric Point: 5.3369
>NTDB_id=229456 CA922_RS04905 WP_011213355.1 1066832..1067431(+) (pilO) [Legionella pneumophila subsp. pneumophila strain Birmingham]
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
Nucleotide
Download Length: 600 bp
>NTDB_id=229456 CA922_RS04905 WP_011213355.1 1066832..1067431(+) (pilO) [Legionella pneumophila subsp. pneumophila strain Birmingham]
ATGGACACAGTCAATTTAAATGAATTAACTCTGGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTAATTTT
AGGCATCAGTATACTGATAATTGGATTAGGATATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCTTATCGTAATCAGTTA
CAGCTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTCCCGGCGAAAAATGAAATGCCTGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACCTTGCATGAATTTAGTGTTGAGGGGGTATCATCCGGGGATGGTAAAACAGTCTCTCAGGATGAATTGGTGAT
GGCTATTACTGCGAAAATATACAGATATCGGGCACAATGA
ATGGACACAGTCAATTTAAATGAATTAACTCTGGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTAATTTT
AGGCATCAGTATACTGATAATTGGATTAGGATATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCTTATCGTAATCAGTTA
CAGCTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTCCCGGCGAAAAATGAAATGCCTGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACCTTGCATGAATTTAGTGTTGAGGGGGTATCATCCGGGGATGGTAAAACAGTCTCTCAGGATGAATTGGTGAT
GGCTATTACTGCGAAAATATACAGATATCGGGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
100 |
100 |
1 |
| comO | Acinetobacter baylyi ADP1 |
39.791 |
95.98 |
0.382 |
| pilO | Acinetobacter baumannii D1279779 |
38.22 |
95.98 |
0.367 |