Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | CAH07_RS08925 | Genome accession | NZ_CP021123 |
| Coordinates | 1689029..1689364 (-) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain SEM-9 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1684029..1694364
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CAH07_RS08875 (CAH07_08760) | comGC | 1684048..1684344 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| CAH07_RS08880 (CAH07_08765) | comGD | 1684334..1684765 (+) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| CAH07_RS08885 (CAH07_08770) | comGE | 1684749..1685096 (+) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| CAH07_RS08890 (CAH07_08775) | comGF | 1685122..1685505 (+) | 384 | WP_015251713.1 | ComG operon protein ComGF | Machinery gene |
| CAH07_RS08895 (CAH07_08780) | comGG | 1685506..1685880 (+) | 375 | WP_015251714.1 | ComG operon protein ComGG | Machinery gene |
| CAH07_RS08900 (CAH07_08785) | spoIITA | 1685951..1686130 (+) | 180 | WP_003230176.1 | YqzE family protein | - |
| CAH07_RS08905 (CAH07_08790) | yqzG | 1686172..1686498 (-) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| CAH07_RS08910 (CAH07_08795) | tapA | 1686770..1687531 (+) | 762 | WP_015251716.1 | amyloid fiber anchoring/assembly protein TapA | - |
| CAH07_RS08915 (CAH07_08800) | sipW | 1687515..1688087 (+) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| CAH07_RS08920 (CAH07_08805) | tasA | 1688151..1688936 (+) | 786 | WP_015251717.1 | biofilm matrix protein TasA | - |
| CAH07_RS08925 (CAH07_08810) | sinR | 1689029..1689364 (-) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| CAH07_RS08930 (CAH07_08815) | sinI | 1689398..1689571 (-) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| CAH07_RS08935 (CAH07_08820) | yqhG | 1689754..1690548 (-) | 795 | WP_003230200.1 | YqhG family protein | - |
| CAH07_RS08940 (CAH07_08825) | hepAA | 1690569..1692242 (-) | 1674 | WP_004398544.1 | SNF2-related protein | - |
| CAH07_RS08945 (CAH07_08830) | gcvT | 1692684..1693772 (+) | 1089 | WP_015251720.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=228393 CAH07_RS08925 WP_003226345.1 1689029..1689364(-) (sinR) [Bacillus subtilis strain SEM-9]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=228393 CAH07_RS08925 WP_003226345.1 1689029..1689364(-) (sinR) [Bacillus subtilis strain SEM-9]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |