Detailed information NTG0227757

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: XcfCFBP6975P_RS06260
• Genome accession: NZ_CP021006
• Coordinates: 1428884..1429942 (+)
• Length: 352 a.a.
• NCBI ID: WP_011348458.1
• Uniprot ID: -
• Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1423884..1434942

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
XcfCFBP6975P_RS06250 (XcfCFBP6975P_16760)	-	1425294..1425944 (-)	651	WP_022558570.1	hypothetical protein	-
XcfCFBP6975P_RS06255 (XcfCFBP6975P_16765)	-	1426245..1428671 (-)	2427	WP_022558571.1	penicillin-binding protein 1A	-
XcfCFBP6975P_RS06260 (XcfCFBP6975P_16770)	comM	1428884..1429942 (+)	1059	WP_011348458.1	pilus assembly protein PilM	Machinery gene
XcfCFBP6975P_RS06265 (XcfCFBP6975P_16775)	-	1429942..1430724 (+)	783	WP_007974441.1	PilN domain-containing protein	-
XcfCFBP6975P_RS06270 (XcfCFBP6975P_16780)	-	1430721..1431386 (+)	666	WP_007967621.1	type 4a pilus biogenesis protein PilO	-
XcfCFBP6975P_RS06275 (XcfCFBP6975P_16785)	-	1431383..1431916 (+)	534	WP_003486179.1	pilus assembly protein PilP	-
XcfCFBP6975P_RS06280 (XcfCFBP6975P_16790)	-	1431936..1433882 (+)	1947	WP_033480966.1	type IV pilus secretin PilQ family protein	-
XcfCFBP6975P_RS06285 (XcfCFBP6975P_16795)	-	1433900..1434721 (+)	822	WP_234710359.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37606.21 Da
• Isoelectric Point: 4.3924

>NTDB_id=227757 XcfCFBP6975P_RS06260 WP_011348458.1 1428884..1429942(+) (comM) [Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975]
MGLLPKSQSPLIGVDISSTAVKLLQLSRSGNRFRVEHYAVEPLPPNAVVEKNIVEVEAVGEAIRRAINRSGSKAKNAAAA
VAGSAVITKLIPMPADLDDSDLEAQVELEATNYIPYPIEEVNLDFEVLGPMPNSPDMVQVLLAASRSENVELRQSALELG
GLTAKVMDVEAFAVENAFALVASELPVAADAVVALVDIGATMTTLSVLRSGRSLYSREQVFGGKQLTDEVMRRYGLTYEE
AGLAKRQGGLPESYEVEVLEPFKEATVQQISRLLQFFYAGSEFNRVDCIVLAGGCAALARLPEMVEEQLGVTTVVANPLA
QMTLGPKVQAHALALDAPALMIATGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=227757 XcfCFBP6975P_RS06260 WP_011348458.1 1428884..1429942(+) (comM) [Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975]
GTGGGGCTTTTACCCAAGAGTCAGTCGCCACTGATTGGTGTCGACATTAGTTCGACTGCCGTGAAGCTCTTGCAGCTATC
GCGCAGCGGGAACCGTTTCCGCGTGGAACATTACGCGGTAGAACCATTGCCGCCGAATGCGGTCGTGGAAAAGAACATCG
TCGAAGTGGAAGCGGTGGGCGAAGCCATTCGCCGCGCCATCAACCGTTCCGGCAGCAAGGCCAAGAACGCGGCAGCTGCC
GTGGCAGGGTCGGCGGTGATCACCAAGTTGATCCCGATGCCGGCCGATCTGGACGATAGCGACCTGGAGGCCCAGGTCGA
ACTGGAAGCCACCAATTACATTCCGTACCCGATCGAGGAAGTGAATCTCGATTTCGAGGTGCTGGGCCCGATGCCCAATA
GCCCGGACATGGTGCAGGTGCTGCTGGCCGCCTCGCGTTCGGAGAATGTGGAACTGCGCCAGTCGGCGCTGGAACTCGGC
GGCCTGACCGCCAAGGTAATGGACGTGGAGGCCTTTGCGGTCGAAAACGCCTTCGCCCTGGTTGCCAGCGAATTGCCGGT
GGCCGCCGATGCGGTGGTGGCGCTGGTGGATATCGGCGCGACCATGACCACGCTGAGCGTGCTGCGCTCCGGTCGCAGTC
TGTATAGCCGCGAGCAGGTGTTCGGCGGCAAGCAGCTCACTGACGAAGTGATGCGCCGTTATGGACTGACCTACGAAGAG
GCTGGCCTTGCCAAGCGCCAGGGCGGCCTGCCGGAAAGCTACGAGGTCGAAGTGCTGGAGCCGTTCAAGGAAGCCACGGT
GCAGCAGATCAGCCGTCTGCTGCAGTTCTTCTATGCGGGCAGTGAGTTCAACCGCGTCGACTGCATCGTGCTGGCCGGCG
GTTGCGCCGCGCTGGCGCGCCTGCCGGAGATGGTGGAAGAGCAGCTCGGTGTGACCACGGTCGTTGCAAATCCGCTTGCC
CAGATGACGCTTGGCCCGAAGGTTCAGGCCCATGCGCTGGCGCTGGATGCGCCTGCACTGATGATCGCCACCGGCCTGGC
CCTGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter baylyi ADP1	51.282	99.716	0.511
comM	Acinetobacter nosocomialis M2	51.136	100	0.511
pilM	Acinetobacter baumannii D1279779	50.852	100	0.509
pilM	Legionella pneumophila strain ERS1305867	47.293	99.716	0.472