Detailed information NTG0227733

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: XcfCFBP6165P_RS16520
• Genome accession: NZ_CP020998
• Coordinates: 3843788..3844846 (-)
• Length: 352 a.a.
• NCBI ID: WP_011348458.1
• Uniprot ID: -
• Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6165
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3838788..3849846

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
XcfCFBP6165P_RS16500 (XcfCFBP6165P_11805)	-	3839848..3841794 (-)	1947	WP_046832294.1	type IV pilus secretin PilQ family protein	-
XcfCFBP6165P_RS16505 (XcfCFBP6165P_11800)	-	3841814..3842347 (-)	534	WP_003486179.1	pilus assembly protein PilP	-
XcfCFBP6165P_RS16510 (XcfCFBP6165P_11795)	-	3842344..3843009 (-)	666	WP_007967621.1	type 4a pilus biogenesis protein PilO	-
XcfCFBP6165P_RS16515 (XcfCFBP6165P_11790)	-	3843006..3843788 (-)	783	WP_007974441.1	PilN domain-containing protein	-
XcfCFBP6165P_RS16520 (XcfCFBP6165P_11785)	comM	3843788..3844846 (-)	1059	WP_011348458.1	pilus assembly protein PilM	Machinery gene
XcfCFBP6165P_RS16525 (XcfCFBP6165P_11780)	-	3845059..3847485 (+)	2427	WP_022558571.1	penicillin-binding protein 1A	-
XcfCFBP6165P_RS16530 (XcfCFBP6165P_11775)	-	3847786..3848436 (+)	651	WP_022558570.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37606.21 Da
• Isoelectric Point: 4.3924

>NTDB_id=227733 XcfCFBP6165P_RS16520 WP_011348458.1 3843788..3844846(-) (comM) [Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6165]
MGLLPKSQSPLIGVDISSTAVKLLQLSRSGNRFRVEHYAVEPLPPNAVVEKNIVEVEAVGEAIRRAINRSGSKAKNAAAA
VAGSAVITKLIPMPADLDDSDLEAQVELEATNYIPYPIEEVNLDFEVLGPMPNSPDMVQVLLAASRSENVELRQSALELG
GLTAKVMDVEAFAVENAFALVASELPVAADAVVALVDIGATMTTLSVLRSGRSLYSREQVFGGKQLTDEVMRRYGLTYEE
AGLAKRQGGLPESYEVEVLEPFKEATVQQISRLLQFFYAGSEFNRVDCIVLAGGCAALARLPEMVEEQLGVTTVVANPLA
QMTLGPKVQAHALALDAPALMIATGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=227733 XcfCFBP6165P_RS16520 WP_011348458.1 3843788..3844846(-) (comM) [Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6165]
GTGGGGCTTTTACCCAAGAGTCAGTCGCCACTGATTGGTGTCGACATTAGTTCGACTGCCGTGAAGCTCTTGCAGCTATC
GCGCAGCGGGAACCGTTTCCGCGTGGAACATTACGCGGTAGAACCATTGCCGCCGAATGCGGTCGTGGAAAAGAACATCG
TCGAAGTGGAAGCGGTGGGCGAAGCCATTCGCCGCGCCATCAACCGTTCCGGCAGCAAGGCCAAGAACGCGGCAGCTGCC
GTGGCAGGGTCGGCGGTGATCACCAAGTTGATCCCGATGCCGGCCGATCTGGACGATAGCGACCTGGAGGCCCAGGTCGA
ACTGGAAGCCACCAATTACATTCCGTACCCGATCGAGGAAGTGAATCTCGATTTCGAGGTGCTGGGCCCGATGCCCAATA
GCCCGGACATGGTGCAGGTGCTGCTGGCCGCCTCGCGTTCGGAGAATGTGGAACTGCGCCAGTCGGCGCTGGAACTCGGC
GGCCTGACCGCCAAGGTAATGGACGTGGAGGCCTTTGCGGTCGAAAACGCCTTCGCCCTGGTTGCCAGCGAATTGCCGGT
GGCCGCCGATGCGGTGGTGGCGCTGGTGGATATCGGCGCGACCATGACCACGCTGAGCGTGCTGCGCTCCGGTCGCAGTC
TGTATAGCCGCGAGCAGGTGTTCGGCGGCAAGCAGCTCACTGACGAAGTGATGCGCCGTTATGGACTGACCTACGAAGAG
GCTGGCCTTGCCAAGCGCCAGGGCGGCCTGCCGGAAAGCTACGAGGTCGAAGTGCTGGAGCCGTTCAAGGAAGCCACGGT
GCAGCAGATCAGCCGTCTGCTGCAGTTCTTCTATGCGGGCAGTGAGTTCAACCGCGTCGACTGCATCGTGCTGGCCGGCG
GTTGCGCCGCGCTGGCGCGCCTGCCGGAGATGGTGGAAGAGCAGCTCGGTGTGACCACGGTCGTTGCAAATCCGCTTGCC
CAGATGACGCTTGGCCCGAAGGTTCAGGCCCATGCGCTGGCGCTGGATGCGCCTGCACTGATGATCGCCACCGGCCTGGC
CCTGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter baylyi ADP1	51.282	99.716	0.511
comM	Acinetobacter nosocomialis M2	51.136	100	0.511
pilM	Acinetobacter baumannii D1279779	50.852	100	0.509
pilM	Legionella pneumophila strain ERS1305867	47.293	99.716	0.472