Detailed information NTG0227646

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: XcfCFBP6990P_RS16830
• Genome accession: NZ_CP020983
• Coordinates: 3879578..3880636 (-)
• Length: 352 a.a.
• NCBI ID: WP_011348458.1
• Uniprot ID: -
• Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6990
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3874578..3885636

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
XcfCFBP6990P_RS16810 (XcfCFBP6990P_16505)	-	3875635..3877584 (-)	1950	WP_033485652.1	type IV pilus secretin PilQ family protein	-
XcfCFBP6990P_RS16815 (XcfCFBP6990P_16510)	-	3877604..3878137 (-)	534	WP_003486179.1	pilus assembly protein PilP	-
XcfCFBP6990P_RS16820 (XcfCFBP6990P_16515)	-	3878134..3878799 (-)	666	WP_007967621.1	type 4a pilus biogenesis protein PilO	-
XcfCFBP6990P_RS16825 (XcfCFBP6990P_16520)	-	3878796..3879578 (-)	783	WP_007974441.1	PilN domain-containing protein	-
XcfCFBP6990P_RS16830 (XcfCFBP6990P_16525)	comM	3879578..3880636 (-)	1059	WP_011348458.1	pilus assembly protein PilM	Machinery gene
XcfCFBP6990P_RS16835 (XcfCFBP6990P_16530)	-	3880849..3883275 (+)	2427	WP_007967628.1	penicillin-binding protein 1A	-
XcfCFBP6990P_RS16840 (XcfCFBP6990P_16535)	-	3883576..3884226 (+)	651	WP_022558570.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37606.21 Da
• Isoelectric Point: 4.3924

>NTDB_id=227646 XcfCFBP6990P_RS16830 WP_011348458.1 3879578..3880636(-) (comM) [Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6990]
MGLLPKSQSPLIGVDISSTAVKLLQLSRSGNRFRVEHYAVEPLPPNAVVEKNIVEVEAVGEAIRRAINRSGSKAKNAAAA
VAGSAVITKLIPMPADLDDSDLEAQVELEATNYIPYPIEEVNLDFEVLGPMPNSPDMVQVLLAASRSENVELRQSALELG
GLTAKVMDVEAFAVENAFALVASELPVAADAVVALVDIGATMTTLSVLRSGRSLYSREQVFGGKQLTDEVMRRYGLTYEE
AGLAKRQGGLPESYEVEVLEPFKEATVQQISRLLQFFYAGSEFNRVDCIVLAGGCAALARLPEMVEEQLGVTTVVANPLA
QMTLGPKVQAHALALDAPALMIATGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=227646 XcfCFBP6990P_RS16830 WP_011348458.1 3879578..3880636(-) (comM) [Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6990]
GTGGGGCTTTTACCCAAGAGTCAGTCGCCACTGATTGGTGTCGACATTAGTTCGACTGCCGTGAAGCTCTTGCAGCTATC
GCGCAGCGGGAACCGTTTCCGCGTGGAACATTACGCGGTAGAACCATTGCCGCCGAATGCGGTCGTGGAAAAGAACATCG
TCGAAGTGGAAGCGGTGGGCGAAGCCATTCGCCGCGCCATCAACCGTTCCGGCAGCAAGGCCAAGAACGCGGCAGCTGCC
GTGGCAGGGTCGGCGGTGATCACCAAGTTGATCCCGATGCCGGCCGATCTGGACGATAGCGACCTGGAGGCCCAGGTCGA
ACTGGAAGCCACCAATTACATTCCGTACCCGATCGAGGAAGTGAATCTCGATTTCGAGGTGCTGGGCCCGATGCCCAATA
GCCCGGACATGGTGCAGGTGCTGCTGGCCGCCTCGCGTTCGGAGAATGTGGAACTGCGCCAGTCGGCGCTGGAACTCGGC
GGCCTGACCGCCAAGGTAATGGACGTGGAGGCCTTTGCGGTCGAAAACGCCTTCGCCCTGGTTGCCAGCGAATTGCCGGT
GGCCGCCGATGCGGTGGTGGCGCTGGTGGATATCGGCGCGACCATGACCACGCTGAGCGTGCTGCGCTCCGGTCGCAGTC
TGTATAGCCGCGAGCAGGTGTTCGGCGGCAAGCAGCTCACTGACGAAGTGATGCGCCGTTATGGACTGACCTACGAAGAG
GCTGGCCTTGCCAAGCGCCAGGGCGGCCTGCCGGAAAGCTACGAGGTCGAAGTGCTGGAGCCGTTCAAGGAAGCCACGGT
GCAGCAGATCAGCCGTCTGCTGCAGTTCTTCTATGCGGGCAGTGAGTTCAACCGCGTCGACTGCATCGTGCTGGCCGGCG
GTTGCGCCGCGCTGGCGCGCCTGCCGGAGATGGTGGAAGAGCAGCTCGGTGTGACCACGGTCGTTGCAAATCCGCTTGCC
CAGATGACGCTTGGCCCGAAGGTTCAGGCCCATGCGCTGGCGCTGGATGCGCCTGCACTGATGATCGCCACCGGCCTGGC
CCTGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter baylyi ADP1	51.282	99.716	0.511
comM	Acinetobacter nosocomialis M2	51.136	100	0.511
pilM	Acinetobacter baumannii D1279779	50.852	100	0.509
pilM	Legionella pneumophila strain ERS1305867	47.293	99.716	0.472