Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | B9P52_RS11075 | Genome accession | NZ_CP020917 |
| Coordinates | 2383307..2383819 (+) | Length | 170 a.a. |
| NCBI ID | WP_062680943.1 | Uniprot ID | A0A6J5B160 |
| Organism | Achromobacter denitrificans strain PR1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2378307..2388819
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B9P52_RS11065 (B9P52_11065) | uvrA | 2378758..2381643 (-) | 2886 | WP_062680939.1 | excinuclease ABC subunit UvrA | - |
| B9P52_RS11070 (B9P52_11070) | - | 2381822..2383006 (+) | 1185 | WP_062680941.1 | MFS transporter | - |
| B9P52_RS11075 (B9P52_11075) | ssb | 2383307..2383819 (+) | 513 | WP_062680943.1 | single-stranded DNA-binding protein | Machinery gene |
| B9P52_RS11080 (B9P52_11080) | - | 2383995..2384474 (+) | 480 | WP_088147275.1 | hypothetical protein | - |
| B9P52_RS11085 (B9P52_11085) | - | 2384485..2386197 (+) | 1713 | WP_088147274.1 | hypothetical protein | - |
| B9P52_RS11090 (B9P52_11090) | - | 2386205..2386402 (+) | 198 | WP_062680949.1 | hypothetical protein | - |
| B9P52_RS11095 (B9P52_11095) | - | 2386399..2386980 (+) | 582 | WP_088446590.1 | hypothetical protein | - |
| B9P52_RS11100 (B9P52_11100) | - | 2386990..2388540 (+) | 1551 | WP_062680952.1 | AAA family ATPase | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 18377.39 Da Isoelectric Point: 5.9656
>NTDB_id=227139 B9P52_RS11075 WP_062680943.1 2383307..2383819(+) (ssb) [Achromobacter denitrificans strain PR1]
MASVNKVILVGNLGRDPEVRYSPDGAAICNMSIATTSTWKDKASGERREETEWHRVVMYNRLAEIAGEYLKKGRSVYIEG
RLKTRKWQDKDTGADRYSTEIVADQMQMLGGREDGGGGGASYGGGGGYDDAPRQQRAPAQRPAPQQRPAPAAAPASSGAN
LADMDDDIPF
MASVNKVILVGNLGRDPEVRYSPDGAAICNMSIATTSTWKDKASGERREETEWHRVVMYNRLAEIAGEYLKKGRSVYIEG
RLKTRKWQDKDTGADRYSTEIVADQMQMLGGREDGGGGGASYGGGGGYDDAPRQQRAPAQRPAPQQRPAPAAAPASSGAN
LADMDDDIPF
Nucleotide
Download Length: 513 bp
>NTDB_id=227139 B9P52_RS11075 WP_062680943.1 2383307..2383819(+) (ssb) [Achromobacter denitrificans strain PR1]
ATGGCATCGGTTAACAAAGTCATACTCGTGGGCAATCTGGGACGCGACCCGGAAGTCCGCTATAGCCCCGACGGGGCGGC
AATCTGCAATATGTCCATTGCCACCACCTCCACCTGGAAAGACAAGGCGTCGGGCGAACGCCGCGAAGAAACGGAATGGC
ACCGCGTCGTCATGTACAACCGCCTGGCCGAAATCGCCGGCGAATACCTGAAGAAGGGCCGTTCGGTCTACATCGAAGGC
CGCCTGAAGACGCGCAAGTGGCAAGACAAGGACACCGGCGCTGACCGCTACAGCACCGAAATCGTCGCCGACCAGATGCA
GATGCTGGGCGGCCGCGAAGACGGCGGCGGCGGTGGCGCCAGCTACGGTGGTGGCGGCGGCTACGACGACGCGCCGCGCC
AGCAGCGCGCGCCGGCGCAGCGCCCGGCGCCCCAGCAGCGCCCGGCTCCCGCGGCGGCTCCGGCCAGCAGCGGCGCCAAC
CTGGCGGACATGGACGACGACATTCCGTTCTGA
ATGGCATCGGTTAACAAAGTCATACTCGTGGGCAATCTGGGACGCGACCCGGAAGTCCGCTATAGCCCCGACGGGGCGGC
AATCTGCAATATGTCCATTGCCACCACCTCCACCTGGAAAGACAAGGCGTCGGGCGAACGCCGCGAAGAAACGGAATGGC
ACCGCGTCGTCATGTACAACCGCCTGGCCGAAATCGCCGGCGAATACCTGAAGAAGGGCCGTTCGGTCTACATCGAAGGC
CGCCTGAAGACGCGCAAGTGGCAAGACAAGGACACCGGCGCTGACCGCTACAGCACCGAAATCGTCGCCGACCAGATGCA
GATGCTGGGCGGCCGCGAAGACGGCGGCGGCGGTGGCGCCAGCTACGGTGGTGGCGGCGGCTACGACGACGCGCCGCGCC
AGCAGCGCGCGCCGGCGCAGCGCCCGGCGCCCCAGCAGCGCCCGGCTCCCGCGGCGGCTCCGGCCAGCAGCGGCGCCAAC
CTGGCGGACATGGACGACGACATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
54.645 |
100 |
0.588 |
| ssb | Neisseria gonorrhoeae MS11 |
52.198 |
100 |
0.559 |
| ssb | Glaesserella parasuis strain SC1401 |
50 |
100 |
0.547 |
| ssb | Neisseria meningitidis MC58 |
51.381 |
100 |
0.547 |