Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | Bra5_RS10945 | Genome accession | NZ_CP020896 |
| Coordinates | 2169137..2169652 (+) | Length | 171 a.a. |
| NCBI ID | WP_004671899.1 | Uniprot ID | A0A1C3XWR3 |
| Organism | Rhizobium phaseoli Brasil 5 strain Bra5 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2164137..2174652
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Bra5_RS10930 (Bra5_CH02167) | - | 2164645..2165451 (-) | 807 | WP_085743633.1 | DUF72 domain-containing protein | - |
| Bra5_RS10935 (Bra5_CH02168) | - | 2165475..2165936 (-) | 462 | WP_085742502.1 | GNAT family N-acetyltransferase | - |
| Bra5_RS10940 (Bra5_CH02169) | uvrA | 2165933..2168854 (-) | 2922 | WP_085742503.1 | excinuclease ABC subunit UvrA | - |
| Bra5_RS10945 (Bra5_CH02170) | ssb | 2169137..2169652 (+) | 516 | WP_004671899.1 | single-stranded DNA-binding protein | Machinery gene |
| Bra5_RS10950 (Bra5_CH02171) | - | 2169755..2170402 (-) | 648 | WP_004671901.1 | MarC family protein | - |
| Bra5_RS10955 (Bra5_CH02172) | gyrA | 2170640..2173462 (+) | 2823 | WP_085742504.1 | DNA gyrase subunit A | - |
| Bra5_RS33565 (Bra5_CH02174) | - | 2173885..2174040 (-) | 156 | WP_003539654.1 | hypothetical protein | - |
| Bra5_RS33830 | - | 2174183..2174362 (-) | 180 | WP_225881820.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 18406.10 Da Isoelectric Point: 5.3093
>NTDB_id=226990 Bra5_RS10945 WP_004671899.1 2169137..2169652(+) (ssb) [Rhizobium phaseoli Brasil 5 strain Bra5]
MAGSVNKVILVGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTEWHTVVVFNEGLCKVVEQYVKKGAKLYI
EGQLQTRKWQDQQGQDRYSTEVVLQGFSSTLTMLDGRGDGGGASSGFGGGRGGSSNNDYGDDYGAPAPSSSPSRGGGGGN
FSRDLDDDIPF
MAGSVNKVILVGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTEWHTVVVFNEGLCKVVEQYVKKGAKLYI
EGQLQTRKWQDQQGQDRYSTEVVLQGFSSTLTMLDGRGDGGGASSGFGGGRGGSSNNDYGDDYGAPAPSSSPSRGGGGGN
FSRDLDDDIPF
Nucleotide
Download Length: 516 bp
>NTDB_id=226990 Bra5_RS10945 WP_004671899.1 2169137..2169652(+) (ssb) [Rhizobium phaseoli Brasil 5 strain Bra5]
ATGGCTGGTAGCGTGAACAAGGTAATTCTGGTTGGAAACGTGGGTGCAGATCCCGAAATCCGCCGTACTCAGGATGGCCG
GCCGATCGCCAATCTTCGTATCGCGACCTCGGAGACCTGGCGTGACCGCAATTCCGGCGAACGCCGCGAAAAGACCGAAT
GGCACACCGTCGTCGTCTTCAACGAAGGCCTGTGCAAGGTCGTCGAGCAATATGTGAAGAAGGGCGCCAAGCTCTATATC
GAAGGCCAGTTGCAGACCCGCAAGTGGCAGGACCAGCAGGGCCAGGACCGCTACTCGACGGAAGTGGTGCTGCAGGGCTT
CAGCTCGACGCTGACGATGCTCGACGGCCGCGGCGATGGCGGCGGCGCAAGCTCCGGCTTCGGCGGCGGCCGCGGCGGCA
GCAGCAACAATGATTACGGCGACGATTACGGCGCCCCGGCTCCCTCTTCATCGCCGAGCCGCGGCGGTGGCGGCGGCAAC
TTCTCGCGCGATCTCGACGACGACATCCCGTTCTGA
ATGGCTGGTAGCGTGAACAAGGTAATTCTGGTTGGAAACGTGGGTGCAGATCCCGAAATCCGCCGTACTCAGGATGGCCG
GCCGATCGCCAATCTTCGTATCGCGACCTCGGAGACCTGGCGTGACCGCAATTCCGGCGAACGCCGCGAAAAGACCGAAT
GGCACACCGTCGTCGTCTTCAACGAAGGCCTGTGCAAGGTCGTCGAGCAATATGTGAAGAAGGGCGCCAAGCTCTATATC
GAAGGCCAGTTGCAGACCCGCAAGTGGCAGGACCAGCAGGGCCAGGACCGCTACTCGACGGAAGTGGTGCTGCAGGGCTT
CAGCTCGACGCTGACGATGCTCGACGGCCGCGGCGATGGCGGCGGCGCAAGCTCCGGCTTCGGCGGCGGCCGCGGCGGCA
GCAGCAACAATGATTACGGCGACGATTACGGCGCCCCGGCTCCCTCTTCATCGCCGAGCCGCGGCGGTGGCGGCGGCAAC
TTCTCGCGCGATCTCGACGACGACATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
48.571 |
100 |
0.497 |
| ssb | Glaesserella parasuis strain SC1401 |
44.681 |
100 |
0.491 |
| ssb | Neisseria gonorrhoeae MS11 |
37.778 |
100 |
0.398 |
| ssb | Neisseria meningitidis MC58 |
37.778 |
100 |
0.398 |