Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | B9J09_RS07810 | Genome accession | NZ_CP020870 |
| Coordinates | 1582246..1582740 (-) | Length | 164 a.a. |
| NCBI ID | WP_004083791.1 | Uniprot ID | Q9PDI7 |
| Organism | Xylella fastidiosa subsp. pauca strain De Donno | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1577246..1587740
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B9J09_RS07795 (B9J09_07795) | gloA | 1577505..1578032 (+) | 528 | WP_010893902.1 | lactoylglutathione lyase | - |
| B9J09_RS07800 (B9J09_07800) | - | 1578151..1579410 (-) | 1260 | WP_232755946.1 | cation:proton antiporter | - |
| B9J09_RS07805 (B9J09_07805) | - | 1579721..1580632 (-) | 912 | WP_010893900.1 | class I SAM-dependent methyltransferase | - |
| B9J09_RS07810 (B9J09_07810) | ssb | 1582246..1582740 (-) | 495 | WP_004083791.1 | single-stranded DNA-binding protein | Machinery gene |
| B9J09_RS07815 (B9J09_07815) | - | 1582989..1583987 (+) | 999 | WP_023907801.1 | polyprenyl synthetase family protein | - |
| B9J09_RS07820 (B9J09_07820) | cyoA | 1584451..1585410 (+) | 960 | WP_046419442.1 | ubiquinol oxidase subunit II | - |
| B9J09_RS07825 (B9J09_07825) | cyoB | 1585404..1587401 (+) | 1998 | WP_046419440.1 | cytochrome o ubiquinol oxidase subunit I | - |
Sequence
Protein
Download Length: 164 a.a. Molecular weight: 18211.20 Da Isoelectric Point: 5.9575
>NTDB_id=226700 B9J09_RS07810 WP_004083791.1 1582246..1582740(-) (ssb) [Xylella fastidiosa subsp. pauca strain De Donno]
MARGINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKEGNTQERTEWHRVKFFGKLGEIAGEYLRKGSQCYIEG
SIRYDKFTGQDGQERYVTEIVADEMQMLGGRSDGGGMGGGGERPQRQTSQRQDYAPRRQARQPSQSPQSSPPPMDDFADD
DIPF
MARGINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKEGNTQERTEWHRVKFFGKLGEIAGEYLRKGSQCYIEG
SIRYDKFTGQDGQERYVTEIVADEMQMLGGRSDGGGMGGGGERPQRQTSQRQDYAPRRQARQPSQSPQSSPPPMDDFADD
DIPF
Nucleotide
Download Length: 495 bp
>NTDB_id=226700 B9J09_RS07810 WP_004083791.1 1582246..1582740(-) (ssb) [Xylella fastidiosa subsp. pauca strain De Donno]
ATGGCCCGTGGTATCAATAAAGTCATCCTCGTCGGTAACCTCGGTAACGATCCGGATATCAAATACACCCAAGGTGGTAT
GACGATCACTACCATCAGCTTGGCGACAACCAGTGTGCGTAAGGACAAGGAGGGCAATACCCAGGAGCGGACCGAATGGC
ACAGGGTCAAGTTTTTCGGAAAACTCGGTGAGATTGCCGGGGAATATCTACGTAAGGGATCACAGTGCTATATCGAAGGG
AGCATCCGCTATGACAAGTTCACTGGCCAGGATGGTCAGGAGCGCTATGTTACCGAGATCGTTGCTGATGAGATGCAAAT
GTTGGGTGGCCGTAGCGATGGCGGTGGTATGGGCGGGGGCGGTGAGCGCCCGCAGCGTCAAACATCGCAGCGTCAGGATT
ACGCCCCACGTCGCCAGGCTCGGCAGCCGTCACAGTCGCCGCAATCTTCACCGCCGCCGATGGACGATTTCGCTGATGAC
GATATTCCTTTCTAA
ATGGCCCGTGGTATCAATAAAGTCATCCTCGTCGGTAACCTCGGTAACGATCCGGATATCAAATACACCCAAGGTGGTAT
GACGATCACTACCATCAGCTTGGCGACAACCAGTGTGCGTAAGGACAAGGAGGGCAATACCCAGGAGCGGACCGAATGGC
ACAGGGTCAAGTTTTTCGGAAAACTCGGTGAGATTGCCGGGGAATATCTACGTAAGGGATCACAGTGCTATATCGAAGGG
AGCATCCGCTATGACAAGTTCACTGGCCAGGATGGTCAGGAGCGCTATGTTACCGAGATCGTTGCTGATGAGATGCAAAT
GTTGGGTGGCCGTAGCGATGGCGGTGGTATGGGCGGGGGCGGTGAGCGCCCGCAGCGTCAAACATCGCAGCGTCAGGATT
ACGCCCCACGTCGCCAGGCTCGGCAGCCGTCACAGTCGCCGCAATCTTCACCGCCGCCGATGGACGATTTCGCTGATGAC
GATATTCCTTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
49.153 |
100 |
0.53 |
| ssb | Glaesserella parasuis strain SC1401 |
45.81 |
100 |
0.5 |
| ssb | Neisseria meningitidis MC58 |
41.618 |
100 |
0.439 |
| ssb | Neisseria gonorrhoeae MS11 |
41.04 |
100 |
0.433 |