Detailed information NTG0022612

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: SPYM18_RS08865
• Genome accession: NC_003485
• Coordinates: 1722180..1723448 (+)
• Length: 422 a.a.
• NCBI ID: WP_011018264.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes MGAS8232
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1717180..1728448

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPYM18_RS08850 (spyM18_2055)	-	1717633..1719606 (+)	1974	WP_011018261.1	amidase family protein	-
SPYM18_RS08855 (spyM18_2056)	pabB	1719791..1721548 (+)	1758	WP_011018262.1	aminodeoxychorismate synthase component I	-
SPYM18_RS08860 (spyM18_2057)	-	1721581..1722147 (+)	567	WP_011018263.1	aminodeoxychorismate/anthranilate synthase component II	-
SPYM18_RS08865 (spyM18_2058)	rarA	1722180..1723448 (+)	1269	WP_011018264.1	replication-associated recombination protein A	Machinery gene
SPYM18_RS08875 (spyM18_2060)	-	1723946..1724386 (+)	441	WP_011018265.1	GNAT family N-acetyltransferase	-
SPYM18_RS08880 (spyM18_2061)	-	1724441..1724947 (+)	507	WP_011018266.1	DNA topology modulation protein	-
SPYM18_RS08885 (spyM18_2064)	smeZ	1725196..1725897 (+)	702	WP_011018268.1	streptococcal mitogenic exotoxin SmeZ	-
SPYM18_RS10650 (spyM18_2065)	-	1726314..1726448 (-)	135	WP_011018269.1	hypothetical protein	-
SPYM18_RS08895 (spyM18_2066)	-	1726627..1728255 (+)	1629	WP_011018270.1	ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46671.15 Da
• Isoelectric Point: 6.3774

>NTDB_id=22612 SPYM18_RS08865 WP_011018264.1 1722180..1723448(+) (rarA) [Streptococcus pyogenes MGAS8232]
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTRYAFRTFNATIDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTSPNEDSSRHISLETMENSLQRSYITMDKNGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGHYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLLD

Nucleotide

• Length: 1269 bp

>NTDB_id=22612 SPYM18_RS08865 WP_011018264.1 1722180..1723448(+) (rarA) [Streptococcus pyogenes MGAS8232]
ATGCCTGATCATTTAGCGCTCAGAATGCGCCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGCGAAGG
CAAAATCATCCGTCGCATGGTGGAAGCAAATAGACTATCGTCCATGATCCTCTATGGCCCTCCAGGAATCGGTAAAACTT
CCATTGCTTCTGCTATTGCTGGTACTACTAGATATGCCTTTCGGACCTTTAATGCCACCATTGACAGTAAAAAACGTCTC
CAAGAAATTGCGGAAGAAGCTAAATTTTCTGGTGGCTTGGTATTATTACTAGACGAGATTCATCGCCTTGACAAGACAAA
ACAAGATTTTCTTTTACCTTTACTTGAGAATGGCACCATTATCATGATTGGCGCAACCACTGAGAACCCCTTCTTTTCAG
TGACACCCGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACTTCTCCTAATGAAGATAGTAGCC
GTCATATTAGTCTAGAGACAATGGAAAATAGTCTGCAGCGTAGTTATATTACCATGGATAAAAACGGGGACGGGCATTAT
GATGTTTTATCTGCCTTACAAAAATCCATTAGAGGTTCTGATGTCAATGCTAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGCAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCTCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCTCTATCTCCTAAATCAAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATCTTAGAGACGGGCATTATGCTGGCAGTAAGGACCTAGGCAATGCCAAAGATTACCTCT
ACCCACACGCCTACCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACCGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGATAAGCTCTTAGACTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (174-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.569	99.052	0.59