Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | B5P37_RS06175 | Genome accession | NZ_CP020773 |
| Coordinates | 1348294..1348797 (+) | Length | 167 a.a. |
| NCBI ID | WP_085237410.1 | Uniprot ID | A0AAC9RTP8 |
| Organism | Staphylococcus lutrae strain ATCC 700373 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1343294..1353797
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B5P37_RS12265 | - | 1344080..1344202 (-) | 123 | WP_276307739.1 | hypothetical protein | - |
| B5P37_RS06160 (B5P37_06160) | argS | 1344318..1345982 (+) | 1665 | WP_085237407.1 | arginine--tRNA ligase | - |
| B5P37_RS06165 (B5P37_06165) | - | 1346213..1347649 (-) | 1437 | WP_085237408.1 | B domain-containing protein | - |
| B5P37_RS06170 (B5P37_06170) | rpsF | 1347976..1348272 (+) | 297 | WP_085237409.1 | 30S ribosomal protein S6 | - |
| B5P37_RS06175 (B5P37_06175) | ssbA | 1348294..1348797 (+) | 504 | WP_085237410.1 | single-stranded DNA-binding protein | Machinery gene |
| B5P37_RS06180 (B5P37_06180) | rpsR | 1348849..1349091 (+) | 243 | WP_014614919.1 | 30S ribosomal protein S18 | - |
| B5P37_RS06185 (B5P37_06185) | - | 1349645..1350220 (+) | 576 | WP_085237411.1 | CPBP family glutamic-type intramembrane protease | - |
| B5P37_RS06195 (B5P37_06195) | - | 1350654..1351544 (+) | 891 | WP_085237413.1 | ABC transporter ATP-binding protein | - |
| B5P37_RS06200 (B5P37_06200) | - | 1351545..1352297 (+) | 753 | WP_085237414.1 | amino acid transporter | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18663.35 Da Isoelectric Point: 5.6586
>NTDB_id=225830 B5P37_RS06175 WP_085237410.1 1348294..1348797(+) (ssbA) [Staphylococcus lutrae strain ATCC 700373]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRKQAENVSNFLFKGSLAGVDGRLQSR
SYENQEGRRVFVTEVVCDSVQFLEPKSQNQRHANQNQGHQFDSYNQGFGGQQQGQNSSYQNNHQPANDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRKQAENVSNFLFKGSLAGVDGRLQSR
SYENQEGRRVFVTEVVCDSVQFLEPKSQNQRHANQNQGHQFDSYNQGFGGQQQGQNSSYQNNHQPANDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=225830 B5P37_RS06175 WP_085237410.1 1348294..1348797(+) (ssbA) [Staphylococcus lutrae strain ATCC 700373]
ATGCTTAACAGAGTCGTATTAGTAGGTCGATTAACTAAAGATCCGGAATACAGAACGACACCCTCAGGCGTAAGTGTAGC
GACTTTTACTTTAGCGGTTAATCGTACATTTACGAATGCGCAAGGGGAACGCGAAGCAGACTTCATCAACTGTGTTGTTT
TCCGAAAACAAGCAGAAAATGTAAGTAATTTCTTATTTAAAGGAAGTCTCGCAGGCGTTGATGGTCGCTTACAATCACGC
AGTTACGAGAATCAAGAAGGCCGACGTGTATTCGTTACTGAAGTCGTTTGTGATAGTGTTCAGTTCCTTGAACCTAAGTC
ACAAAACCAACGTCATGCAAACCAAAACCAAGGGCATCAATTTGATAGCTATAACCAAGGATTTGGTGGACAGCAACAAG
GCCAAAATTCGTCTTATCAAAATAATCATCAACCGGCTAATGATAATCCGTTTGCCAATGCGAATGGACCTATTGATATT
AGCGATGATGATTTACCATTTTAA
ATGCTTAACAGAGTCGTATTAGTAGGTCGATTAACTAAAGATCCGGAATACAGAACGACACCCTCAGGCGTAAGTGTAGC
GACTTTTACTTTAGCGGTTAATCGTACATTTACGAATGCGCAAGGGGAACGCGAAGCAGACTTCATCAACTGTGTTGTTT
TCCGAAAACAAGCAGAAAATGTAAGTAATTTCTTATTTAAAGGAAGTCTCGCAGGCGTTGATGGTCGCTTACAATCACGC
AGTTACGAGAATCAAGAAGGCCGACGTGTATTCGTTACTGAAGTCGTTTGTGATAGTGTTCAGTTCCTTGAACCTAAGTC
ACAAAACCAACGTCATGCAAACCAAAACCAAGGGCATCAATTTGATAGCTATAACCAAGGATTTGGTGGACAGCAACAAG
GCCAAAATTCGTCTTATCAAAATAATCATCAACCGGCTAATGATAATCCGTTTGCCAATGCGAATGGACCTATTGATATT
AGCGATGATGATTTACCATTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
64 |
100 |
0.671 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
57.31 |
100 |
0.587 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.182 |
65.868 |
0.383 |
| ssb | Glaesserella parasuis strain SC1401 |
34.27 |
100 |
0.365 |