Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   B7L44_RS19865 Genome accession   NZ_CP020588
Coordinates   4075141..4076271 (+) Length   376 a.a.
NCBI ID   WP_031944817.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain SSA3     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 4070141..4081271
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7L44_RS19840 (B7L44_19840) - 4070412..4070618 (-) 207 WP_004711026.1 DUF4199 domain-containing protein -
  B7L44_RS19845 (B7L44_19845) - 4070662..4072776 (-) 2115 WP_083009395.1 TonB-dependent copper receptor -
  B7L44_RS19850 (B7L44_19850) - 4072848..4073276 (-) 429 WP_002054220.1 DUF2946 family protein -
  B7L44_RS19855 (B7L44_19855) def 4073313..4073843 (-) 531 WP_002054252.1 peptide deformylase -
  B7L44_RS19860 (B7L44_19860) tsaP 4073966..4075120 (+) 1155 WP_004711032.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  B7L44_RS19865 (B7L44_19865) dprA 4075141..4076271 (+) 1131 WP_031944817.1 DNA-processing protein DprA Machinery gene
  B7L44_RS19870 (B7L44_19870) - 4076322..4076891 (+) 570 WP_032012041.1 L-threonylcarbamoyladenylate synthase -
  B7L44_RS19875 (B7L44_19875) - 4077283..4078203 (-) 921 WP_079377500.1 DMT family transporter -
  B7L44_RS19880 (B7L44_19880) - 4078309..4078962 (-) 654 WP_083009397.1 TetR/AcrR family transcriptional regulator -
  B7L44_RS19885 (B7L44_19885) - 4079097..4080311 (+) 1215 WP_031956073.1 MFS transporter -
  B7L44_RS19890 (B7L44_19890) - 4080333..4081097 (+) 765 WP_004711041.1 AraC family transcriptional regulator -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41864.32 Da        Isoelectric Point: 6.4984

>NTDB_id=224578 B7L44_RS19865 WP_031944817.1 4075141..4076271(+) (dprA) [Acinetobacter nosocomialis strain SSA3]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGTCEKATQPDGLAKWSSLGLHANHLKRVNEFQTAQGQAQFEQLIQQV
QQHTDFILTLDDSGYPTQLLPYTDHPPVIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFFISSGLAYG
IDEAAHQGASAHQRTIAVTGTGLDTTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTQWQSQQQSQNEETNTYTSEIP
EHLIDLYQSLDWVGQNIDQLVIHHNVSVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=224578 B7L44_RS19865 WP_031944817.1 4075141..4076271(+) (dprA) [Acinetobacter nosocomialis strain SSA3]
ATGCTCACCCAACTTTCTTCACACCATTACCACACGCTTAAAGTGTGGTATTTGGTGCAGCACTCATTAGTTAGTTTTAA
AAAAATTATCGATTATTTTGGAACTTGTGAAAAAGCAACTCAACCTGATGGTTTAGCAAAGTGGTCCTCTCTGGGGTTAC
ATGCTAATCACTTAAAGCGTGTAAACGAATTTCAAACGGCACAAGGCCAAGCTCAGTTCGAACAGCTTATACAACAAGTT
CAGCAGCATACTGATTTTATTTTGACGTTAGATGACTCTGGCTACCCTACTCAATTACTCCCTTATACAGATCATCCACC
TGTTATTTTTGGAAAAGGTCAGGCACAGGCATTATTGCAACCGCAAATTGCGATTGTCGGTAGCCGAAAACCAAGCCCAC
ATGGACGTCAGGTGGCTTATGATTTTGCCTACTACTTAAGTGAAAAGGGCTTTTTTATTAGTAGTGGTCTGGCTTATGGC
ATTGATGAAGCAGCTCATCAAGGTGCATCCGCTCATCAACGTACAATTGCAGTCACTGGTACGGGCCTAGACACTACCTA
TCCAGCTCAAAATAAAAAACTGGCAGAACATATTTTGGCTCAGAACGGCGCCATTATTACTGAGTTTTTACCTGGTACAC
CGCCATTACAACAGCATTTTCCACGTAGAAACCGAATTGTTAGTGGTTTGAGTTTAGGCGTTTTGGTGGTAGAAGCGACA
TTAAAAAGTGGCTCGCTCATCACGGCCAATAAAGCTGCTGAACAAGGCAAAACCGTATTCGCCATTCCGGGCCATATTTA
TAGTGAGTTCCATCAAGGATGCCATCAACTTATTCGTGAGGGAGCAATTTTAGTTGATCATCCCGAACAAATTATTGAAG
ACCTCGCCTTACCAACTCAATGGCAAAGCCAGCAACAAAGTCAAAATGAAGAAACTAATACGTATACTTCAGAAATTCCT
GAGCATTTGATTGATCTTTATCAGTCTTTAGACTGGGTAGGACAAAATATTGACCAGCTTGTAATTCATCATAATGTTTC
GGTTTCTGAACTGACCTCTTCACTAATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGGCTGTATTTACGTT
GTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

95.479

100

0.955

  dprA Acinetobacter baumannii D1279779

95.479

100

0.955

  dprA Acinetobacter baylyi ADP1

70.866

100

0.718

  dprA Vibrio cholerae strain A1552

43.202

88.032

0.38


Multiple sequence alignment