Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | B7L44_RS02325 | Genome accession | NZ_CP020588 |
| Coordinates | 478791..479228 (+) | Length | 145 a.a. |
| NCBI ID | WP_004711677.1 | Uniprot ID | - |
| Organism | Acinetobacter nosocomialis strain SSA3 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 473791..484228
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7L44_RS02305 (B7L44_02305) | - | 475183..476070 (+) | 888 | WP_002051771.1 | metal-dependent hydrolase | - |
| B7L44_RS02310 (B7L44_02310) | - | 476203..476793 (+) | 591 | WP_002051712.1 | LemA family protein | - |
| B7L44_RS02315 (B7L44_02315) | - | 476815..477897 (+) | 1083 | WP_016803749.1 | TPM domain-containing protein | - |
| B7L44_RS02320 (B7L44_02320) | - | 477891..478451 (+) | 561 | WP_016803748.1 | TPM domain-containing protein | - |
| B7L44_RS02325 (B7L44_02325) | pilA | 478791..479228 (+) | 438 | WP_004711677.1 | pilin | Machinery gene |
| B7L44_RS02330 (B7L44_02330) | - | 479289..480599 (+) | 1311 | WP_016803746.1 | O-antigen ligase family protein | - |
| B7L44_RS02335 (B7L44_02335) | - | 480710..482338 (+) | 1629 | WP_017398294.1 | PglL family O-oligosaccharyltransferase | - |
| B7L44_RS02340 (B7L44_02340) | bfr | 482379..482843 (-) | 465 | WP_000678123.1 | heteropolymeric bacterioferritin subunit Bfr | - |
| B7L44_RS02345 (B7L44_02345) | - | 483088..483282 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| B7L44_RS02350 (B7L44_02350) | - | 483502..483885 (-) | 384 | WP_002051728.1 | RidA family protein | - |
Sequence
Protein
Download Length: 145 a.a. Molecular weight: 14859.86 Da Isoelectric Point: 7.5911
>NTDB_id=224541 B7L44_RS02325 WP_004711677.1 478791..479228(+) (pilA) [Acinetobacter nosocomialis strain SSA3]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLTDITAGKANTETKLAEGLTANLTNATDVGLQASSNAC
SSISVSVATTGLTSIECTLQGTSQISGKKISWERTADSATAGTTGTWRCKTDVADNLRPKSCGAS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLTDITAGKANTETKLAEGLTANLTNATDVGLQASSNAC
SSISVSVATTGLTSIECTLQGTSQISGKKISWERTADSATAGTTGTWRCKTDVADNLRPKSCGAS
Nucleotide
Download Length: 438 bp
>NTDB_id=224541 B7L44_RS02325 WP_004711677.1 478791..479228(+) (pilA) [Acinetobacter nosocomialis strain SSA3]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTTGTAGCGATTATTGGTATTTTGGCAGCGATCGCGAT
TCCTGCTTATCAAAACTATATTGCTAAATCTCAAGTAAGTACAGGACTAACTGATATTACCGCTGGTAAAGCTAATACTG
AAACTAAATTAGCAGAAGGTTTAACTGCTAATTTAACAAATGCTACTGATGTAGGCTTGCAAGCTTCAAGCAATGCTTGT
TCTTCAATTAGTGTGTCAGTTGCTACTACTGGATTAACATCAATTGAATGTACATTACAAGGCACTTCACAAATTAGTGG
CAAGAAAATTTCTTGGGAACGAACAGCTGATAGTGCTACAGCAGGGACTACAGGAACATGGCGTTGTAAAACTGATGTAG
CTGATAATTTACGTCCTAAATCATGTGGTGCATCATAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTTGTAGCGATTATTGGTATTTTGGCAGCGATCGCGAT
TCCTGCTTATCAAAACTATATTGCTAAATCTCAAGTAAGTACAGGACTAACTGATATTACCGCTGGTAAAGCTAATACTG
AAACTAAATTAGCAGAAGGTTTAACTGCTAATTTAACAAATGCTACTGATGTAGGCTTGCAAGCTTCAAGCAATGCTTGT
TCTTCAATTAGTGTGTCAGTTGCTACTACTGGATTAACATCAATTGAATGTACATTACAAGGCACTTCACAAATTAGTGG
CAAGAAAATTTCTTGGGAACGAACAGCTGATAGTGCTACAGCAGGGACTACAGGAACATGGCGTTGTAAAACTGATGTAG
CTGATAATTTACGTCCTAAATCATGTGGTGCATCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
49.66 |
100 |
0.503 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
44.681 |
97.241 |
0.434 |
| comP | Acinetobacter baylyi ADP1 |
41.333 |
100 |
0.428 |
| pilA | Vibrio cholerae strain A1552 |
41.497 |
100 |
0.421 |
| pilA | Vibrio cholerae C6706 |
41.497 |
100 |
0.421 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
41.497 |
100 |
0.421 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
42.958 |
97.931 |
0.421 |
| pilA | Pseudomonas aeruginosa PAK |
38.312 |
100 |
0.407 |