Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | B7L44_RS02375 | Genome accession | NZ_CP020588 |
| Coordinates | 488544..489017 (+) | Length | 157 a.a. |
| NCBI ID | WP_016803890.1 | Uniprot ID | A0A1V0YNQ0 |
| Organism | Acinetobacter nosocomialis strain SSA3 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 483544..494017
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7L44_RS02355 (B7L44_02355) | - | 484007..486112 (-) | 2106 | WP_004711681.1 | RelA/SpoT family protein | - |
| B7L44_RS20140 | - | 486152..486283 (-) | 132 | WP_102990545.1 | hypothetical protein | - |
| B7L44_RS02360 (B7L44_02360) | rpoZ | 486322..486600 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| B7L44_RS02365 (B7L44_02365) | gmk | 486673..487302 (-) | 630 | WP_016803891.1 | guanylate kinase | - |
| B7L44_RS02370 (B7L44_02370) | ispH | 487425..488375 (+) | 951 | WP_002051768.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| B7L44_RS02375 (B7L44_02375) | fimU | 488544..489017 (+) | 474 | WP_016803890.1 | pilus assembly FimT family protein | Machinery gene |
| B7L44_RS02380 (B7L44_02380) | pilV | 489011..489571 (+) | 561 | WP_079377028.1 | type IV pilus modification protein PilV | Machinery gene |
| B7L44_RS02385 (B7L44_02385) | pilW | 489571..490569 (+) | 999 | WP_004884688.1 | PilW family protein | Machinery gene |
| B7L44_RS02390 (B7L44_02390) | pilX | 490566..491381 (+) | 816 | WP_004711686.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16856.44 Da Isoelectric Point: 9.3359
>NTDB_id=224542 B7L44_RS02375 WP_016803890.1 488544..489017(+) (fimU) [Acinetobacter nosocomialis strain SSA3]
MRGITPQEGFTLVELIVTIAVMAIIAMMAAPSMSNLLESKRLDTNQRDLISTLSEAKSQAVLGRQNVSVNLNSAASNTAT
LLNWQPTSNNTLTLKNIAADNTQSSLAITTLTFNANGVVSNITQDALISICNSRINKKKNFILTKLGALVFKAEETC
MRGITPQEGFTLVELIVTIAVMAIIAMMAAPSMSNLLESKRLDTNQRDLISTLSEAKSQAVLGRQNVSVNLNSAASNTAT
LLNWQPTSNNTLTLKNIAADNTQSSLAITTLTFNANGVVSNITQDALISICNSRINKKKNFILTKLGALVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=224542 B7L44_RS02375 WP_016803890.1 488544..489017(+) (fimU) [Acinetobacter nosocomialis strain SSA3]
ATGAGGGGAATTACTCCGCAAGAAGGGTTCACCTTAGTGGAACTCATCGTAACAATTGCAGTCATGGCTATTATTGCAAT
GATGGCTGCGCCGTCTATGTCAAATTTATTAGAAAGTAAACGTTTAGATACTAATCAAAGAGATTTAATTAGCACTCTAT
CTGAGGCGAAAAGTCAGGCTGTGCTTGGTCGTCAGAATGTTTCAGTTAATTTGAATTCAGCGGCTTCTAATACGGCCACT
TTATTAAATTGGCAACCTACTTCTAACAACACCCTAACGCTAAAAAATATAGCTGCTGATAATACCCAAAGTTCTTTAGC
TATCACTACTTTAACATTTAACGCAAATGGAGTTGTGAGTAATATTACTCAGGATGCACTTATATCTATTTGTAATTCAA
GAATAAATAAAAAGAAAAATTTTATACTTACAAAACTTGGAGCTTTGGTTTTTAAAGCTGAGGAGACATGCTAA
ATGAGGGGAATTACTCCGCAAGAAGGGTTCACCTTAGTGGAACTCATCGTAACAATTGCAGTCATGGCTATTATTGCAAT
GATGGCTGCGCCGTCTATGTCAAATTTATTAGAAAGTAAACGTTTAGATACTAATCAAAGAGATTTAATTAGCACTCTAT
CTGAGGCGAAAAGTCAGGCTGTGCTTGGTCGTCAGAATGTTTCAGTTAATTTGAATTCAGCGGCTTCTAATACGGCCACT
TTATTAAATTGGCAACCTACTTCTAACAACACCCTAACGCTAAAAAATATAGCTGCTGATAATACCCAAAGTTCTTTAGC
TATCACTACTTTAACATTTAACGCAAATGGAGTTGTGAGTAATATTACTCAGGATGCACTTATATCTATTTGTAATTCAA
GAATAAATAAAAAGAAAAATTTTATACTTACAAAACTTGGAGCTTTGGTTTTTAAAGCTGAGGAGACATGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
85.987 |
100 |
0.86 |