Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | B5S57_RS18830 | Genome accession | NZ_CP020534 |
| Coordinates | 2849385..2850032 (+) | Length | 215 a.a. |
| NCBI ID | WP_026027842.1 | Uniprot ID | - |
| Organism | Vibrio anguillarum strain 425 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2844385..2855032
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B5S57_RS18815 (B5S57_18680) | - | 2844993..2846435 (-) | 1443 | WP_013857890.1 | hypothetical protein | - |
| B5S57_RS18820 (B5S57_18685) | csrD | 2846448..2848436 (-) | 1989 | WP_029189909.1 | RNase E specificity factor CsrD | - |
| B5S57_RS18825 (B5S57_18690) | ssb | 2848566..2849099 (-) | 534 | WP_013857892.1 | single-stranded DNA-binding protein | Machinery gene |
| B5S57_RS18830 (B5S57_18695) | qstR | 2849385..2850032 (+) | 648 | WP_026027842.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| B5S57_RS18835 (B5S57_18700) | galU | 2850150..2851019 (+) | 870 | WP_013857894.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| B5S57_RS18840 (B5S57_18705) | uvrA | 2851188..2854010 (+) | 2823 | WP_026029161.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 215 a.a. Molecular weight: 25033.82 Da Isoelectric Point: 8.1663
>NTDB_id=223975 B5S57_RS18830 WP_026027842.1 2849385..2850032(+) (qstR) [Vibrio anguillarum strain 425]
MRKANYTRTIYFLCLDKEQEHPYIDHLTDRLGLPIPKIEPEILRQTYCPDKHKILMIDHADYALLQQRLGNCPLSSQHHE
TILINVLQRLTTNDLLTFGHLKGLFYKNDTLDKIAFGLGEIINGQNWLPRHAVSQLLHYYRYAFESHTAQVITDLTAREI
QILRCLQTGASNNQMSEDLFISEFTVKSHLYQIFKKLSVKNRVQAIAWANQNILS
MRKANYTRTIYFLCLDKEQEHPYIDHLTDRLGLPIPKIEPEILRQTYCPDKHKILMIDHADYALLQQRLGNCPLSSQHHE
TILINVLQRLTTNDLLTFGHLKGLFYKNDTLDKIAFGLGEIINGQNWLPRHAVSQLLHYYRYAFESHTAQVITDLTAREI
QILRCLQTGASNNQMSEDLFISEFTVKSHLYQIFKKLSVKNRVQAIAWANQNILS
Nucleotide
Download Length: 648 bp
>NTDB_id=223975 B5S57_RS18830 WP_026027842.1 2849385..2850032(+) (qstR) [Vibrio anguillarum strain 425]
ATGAGAAAAGCAAACTATACCCGCACCATTTACTTTCTTTGCTTAGATAAAGAACAAGAACACCCTTATATTGACCATTT
AACCGATCGGCTTGGACTGCCCATTCCGAAAATTGAGCCTGAAATCCTGCGCCAAACGTATTGTCCAGATAAACACAAAA
TATTGATGATTGACCATGCCGATTATGCGCTACTGCAGCAACGCTTGGGAAACTGCCCATTAAGCAGTCAGCATCATGAA
ACGATCCTTATCAATGTGTTGCAAAGATTAACCACGAATGACTTATTAACCTTTGGCCATTTAAAGGGGCTATTTTATAA
AAATGACACCCTAGATAAAATTGCATTTGGGCTTGGTGAAATCATTAACGGACAAAATTGGCTACCCAGACACGCTGTAA
GCCAGTTACTGCACTACTATCGCTACGCGTTTGAATCCCATACTGCTCAAGTGATTACAGACTTAACCGCCCGCGAAATA
CAGATCCTCCGCTGCTTACAAACTGGCGCATCGAATAACCAAATGTCGGAAGATTTATTCATCAGTGAATTCACGGTCAA
ATCACATCTCTACCAAATATTCAAAAAGCTATCGGTCAAAAATAGGGTCCAAGCGATTGCGTGGGCCAATCAAAATATTC
TGTCTTAA
ATGAGAAAAGCAAACTATACCCGCACCATTTACTTTCTTTGCTTAGATAAAGAACAAGAACACCCTTATATTGACCATTT
AACCGATCGGCTTGGACTGCCCATTCCGAAAATTGAGCCTGAAATCCTGCGCCAAACGTATTGTCCAGATAAACACAAAA
TATTGATGATTGACCATGCCGATTATGCGCTACTGCAGCAACGCTTGGGAAACTGCCCATTAAGCAGTCAGCATCATGAA
ACGATCCTTATCAATGTGTTGCAAAGATTAACCACGAATGACTTATTAACCTTTGGCCATTTAAAGGGGCTATTTTATAA
AAATGACACCCTAGATAAAATTGCATTTGGGCTTGGTGAAATCATTAACGGACAAAATTGGCTACCCAGACACGCTGTAA
GCCAGTTACTGCACTACTATCGCTACGCGTTTGAATCCCATACTGCTCAAGTGATTACAGACTTAACCGCCCGCGAAATA
CAGATCCTCCGCTGCTTACAAACTGGCGCATCGAATAACCAAATGTCGGAAGATTTATTCATCAGTGAATTCACGGTCAA
ATCACATCTCTACCAAATATTCAAAAAGCTATCGGTCAAAAATAGGGTCCAAGCGATTGCGTGGGCCAATCAAAATATTC
TGTCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio cholerae strain A1552 |
66.822 |
99.535 |
0.665 |
| qstR | Vibrio campbellii strain DS40M4 |
52.558 |
100 |
0.526 |
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
52.093 |
100 |
0.521 |