Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | A6J82_RS04440 | Genome accession | NZ_CP020449 |
| Coordinates | 809948..810439 (+) | Length | 163 a.a. |
| NCBI ID | WP_000609585.1 | Uniprot ID | A0AAV3JH34 |
| Organism | Streptococcus agalactiae strain FDAARGOS_254 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 804948..815439
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J82_RS04415 (A6J82_04435) | - | 805721..806221 (+) | 501 | WP_000446812.1 | phosphatase PAP2 family protein | - |
| A6J82_RS04420 (A6J82_04440) | trxA | 806302..806616 (+) | 315 | WP_001162959.1 | thioredoxin | - |
| A6J82_RS04425 (A6J82_04445) | - | 806662..807255 (-) | 594 | WP_000402395.1 | helix-turn-helix domain-containing protein | - |
| A6J82_RS04430 (A6J82_04450) | mutY | 807432..808586 (-) | 1155 | WP_161512068.1 | A/G-specific adenine glycosylase | - |
| A6J82_RS04435 (A6J82_04455) | rpsF | 809649..809936 (+) | 288 | WP_001151773.1 | 30S ribosomal protein S6 | - |
| A6J82_RS04440 (A6J82_04460) | ssbA | 809948..810439 (+) | 492 | WP_000609585.1 | single-stranded DNA-binding protein | Machinery gene |
| A6J82_RS04445 (A6J82_04465) | rpsR | 810484..810723 (+) | 240 | WP_000068665.1 | 30S ribosomal protein S18 | - |
| A6J82_RS04450 (A6J82_04470) | - | 810893..811837 (+) | 945 | WP_000812121.1 | magnesium transporter CorA family protein | - |
| A6J82_RS04455 (A6J82_04475) | - | 811862..812533 (+) | 672 | WP_000174845.1 | DUF1129 domain-containing protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 18165.81 Da Isoelectric Point: 4.9119
>NTDB_id=223112 A6J82_RS04440 WP_000609585.1 809948..810439(+) (ssbA) [Streptococcus agalactiae strain FDAARGOS_254]
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVAESFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDD
LPF
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVAESFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=223112 A6J82_RS04440 WP_000609585.1 809948..810439(+) (ssbA) [Streptococcus agalactiae strain FDAARGOS_254]
ATGATTAATAATGTAGTACTTGTAGGTCGCATGACCCGTGATGCAGAACTTCGTTATACACCAAGTAATCAAGCGGTAGC
CACTTTTTCACTTGCAGTTAATCGTAATTTTAAAAATCAATCTGGCGAACGTGAGGCTGATTTTATTAACTGTGTTATTT
GGCGCCAACAAGCTGAAAACTTGGCTAACTGGGCAAAAAAAGGTGCTTTGGTTGGAATTACAGGTCGTATCCAAACACGT
AATTATGAAAACCAACAAGGTCAACGTGTCTATGTAACAGAAGTTGTTGCGGAAAGTTTCCAATTATTGGAAAGTCGTGC
TACACGAGAAGGTGGTTCACCTAACTCTTATAATAATGGTGGCTATAACAATGCTCCGTCAAATAATAGTTATTCAGCTT
CTTCTCAACAAACACCTAATTTTAGTCGTGATGAGAGTCCGTTTGGTAACTCAAATCCAATGGATATTTCAGATGATGAT
CTACCATTCTAA
ATGATTAATAATGTAGTACTTGTAGGTCGCATGACCCGTGATGCAGAACTTCGTTATACACCAAGTAATCAAGCGGTAGC
CACTTTTTCACTTGCAGTTAATCGTAATTTTAAAAATCAATCTGGCGAACGTGAGGCTGATTTTATTAACTGTGTTATTT
GGCGCCAACAAGCTGAAAACTTGGCTAACTGGGCAAAAAAAGGTGCTTTGGTTGGAATTACAGGTCGTATCCAAACACGT
AATTATGAAAACCAACAAGGTCAACGTGTCTATGTAACAGAAGTTGTTGCGGAAAGTTTCCAATTATTGGAAAGTCGTGC
TACACGAGAAGGTGGTTCACCTAACTCTTATAATAATGGTGGCTATAACAATGCTCCGTCAAATAATAGTTATTCAGCTT
CTTCTCAACAAACACCTAATTTTAGTCGTGATGAGAGTCCGTTTGGTAACTCAAATCCAATGGATATTTCAGATGATGAT
CTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.714 |
100 |
0.62 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.064 |
100 |
0.62 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
55.963 |
66.871 |
0.374 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
56.604 |
65.031 |
0.368 |