Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | A6J51_RS04950 | Genome accession | NZ_CP020423 |
| Coordinates | 823432..823731 (+) | Length | 99 a.a. |
| NCBI ID | WP_105165228.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain FDAARGOS_212 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 818432..828731
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J51_RS04950 (A6J51_04755) | comE | 823432..823731 (+) | 300 | WP_105165228.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| A6J51_RS04955 (A6J51_04760) | comP | 823819..824268 (+) | 450 | WP_002218144.1 | type IV pilin protein | Machinery gene |
| A6J51_RS04960 (A6J51_04765) | - | 824358..824752 (-) | 395 | Protein_811 | 5'-nucleotidase | - |
| A6J51_RS04965 (A6J51_04770) | - | 824965..825315 (+) | 351 | Protein_812 | IS5/IS1182 family transposase | - |
| A6J51_RS04970 (A6J51_04775) | - | 825341..826306 (-) | 966 | WP_002221064.1 | IS30-like element IS1655 family transposase | - |
| A6J51_RS04975 (A6J51_13420) | - | 826396..826521 (+) | 126 | Protein_814 | IS5/IS1182 family transposase | - |
| A6J51_RS04985 (A6J51_04785) | - | 826927..827982 (+) | 1056 | WP_002221681.1 | DNA cytosine methyltransferase | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10238.19 Da Isoelectric Point: 10.5298
>NTDB_id=222760 A6J51_RS04950 WP_105165228.1 823432..823731(+) (comE) [Neisseria meningitidis strain FDAARGOS_212]
MKKIFMLLYMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEYRAQNGAFKSVDDLTKVKGIGPAVLAKLKDQAS
VGAPAPKGPAKPAIPAAKK
MKKIFMLLYMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEYRAQNGAFKSVDDLTKVKGIGPAVLAKLKDQAS
VGAPAPKGPAKPAIPAAKK
Nucleotide
Download Length: 300 bp
>NTDB_id=222760 A6J51_RS04950 WP_105165228.1 823432..823731(+) (comE) [Neisseria meningitidis strain FDAARGOS_212]
ATGAAAAAGATTTTTATGCTGTTGTATATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAAACATCAATGCCGCTTC
GCAGCAGGAGTTGGAGGCGCTGCCGGGCATAGGCCCGGCGAAGGCGAAGGCCATTGCGGAATACCGCGCGCAAAACGGCG
CGTTCAAGTCTGTGGACGATTTGACCAAGGTAAAGGGCATCGGCCCTGCGGTGCTGGCGAAGCTGAAGGATCAGGCTTCG
GTCGGCGCGCCCGCACCAAAAGGCCCAGCCAAACCGGCTATACCGGCCGCTAAAAAATAG
ATGAAAAAGATTTTTATGCTGTTGTATATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAAACATCAATGCCGCTTC
GCAGCAGGAGTTGGAGGCGCTGCCGGGCATAGGCCCGGCGAAGGCGAAGGCCATTGCGGAATACCGCGCGCAAAACGGCG
CGTTCAAGTCTGTGGACGATTTGACCAAGGTAAAGGGCATCGGCCCTGCGGTGCTGGCGAAGCTGAAGGATCAGGCTTCG
GTCGGCGCGCCCGCACCAAAAGGCCCAGCCAAACCGGCTATACCGGCCGCTAAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
91.919 |
100 |
0.919 |
| comE | Neisseria gonorrhoeae MS11 |
91.919 |
100 |
0.919 |
| comE | Neisseria gonorrhoeae MS11 |
91.919 |
100 |
0.919 |
| comE | Neisseria gonorrhoeae MS11 |
91.919 |
100 |
0.919 |
| Cj0011c | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
50.617 |
81.818 |
0.414 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
42.391 |
92.929 |
0.394 |