Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C2H93_RS13100 Genome accession   NZ_CP026036
Coordinates   2573640..2574335 (-) Length   231 a.a.
NCBI ID   WP_249852816.1    Uniprot ID   -
Organism   Bacillus subtilis strain PK5_16     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2568640..2579335
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H93_RS13080 (C2H93_13085) yttA 2569067..2569813 (+) 747 WP_014477720.1 LMBR1 domain-containing protein -
  C2H93_RS13085 (C2H93_13090) bceB 2569850..2571790 (-) 1941 WP_249852246.1 bacitracin ABC transporter permease BceB -
  C2H93_RS13090 (C2H93_13095) bceA 2571780..2572541 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  C2H93_RS13095 (C2H93_13100) bceS 2572643..2573647 (-) 1005 WP_153529855.1 two-component sensor histidine kinase BceS -
  C2H93_RS13100 (C2H93_13105) braR 2573640..2574335 (-) 696 WP_249852816.1 two-component response regulator BceR Regulator
  C2H93_RS13105 (C2H93_13110) ytrF 2574432..2575742 (-) 1311 WP_249852247.1 ABC transporter permease YtrF -
  C2H93_RS13110 (C2H93_13115) ytrE 2575732..2576427 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  C2H93_RS13115 (C2H93_13120) - 2576442..2577419 (-) 978 WP_032726456.1 ABC transporter permease -
  C2H93_RS13120 (C2H93_13125) ytrC 2577449..2578435 (-) 987 WP_249852248.1 ABC transporter permease YtrC -
  C2H93_RS13125 (C2H93_13130) ytrB 2578429..2579307 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26908.82 Da        Isoelectric Point: 5.3731

>NTDB_id=222543 C2H93_RS13100 WP_249852816.1 2573640..2574335(-) (braR) [Bacillus subtilis strain PK5_16]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIISREELIRSLWNDERFVSDNTLTVNVNRLRKKLDVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=222543 C2H93_RS13100 WP_249852816.1 2573640..2574335(-) (braR) [Bacillus subtilis strain PK5_16]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGTTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCTATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAGATGTTCATT
CTTAAACAACTAATAGAGCAAAAAAACAAGATCATCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGTCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.091

95.238

0.372

Multiple sequence alignment