Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | A6J44_RS08150 | Genome accession | NZ_CP020418 |
| Coordinates | 1282043..1282567 (+) | Length | 174 a.a. |
| NCBI ID | WP_003695064.1 | Uniprot ID | Q5F7Y0 |
| Organism | Neisseria gonorrhoeae strain FDAARGOS_205 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1277043..1287567
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J44_RS14665 | - | 1277311..1277541 (-) | 231 | WP_226888043.1 | hypothetical protein | - |
| A6J44_RS08115 (A6J44_08025) | - | 1277558..1278265 (+) | 708 | WP_226888044.1 | opacity family porin | - |
| A6J44_RS08125 (A6J44_08040) | - | 1278627..1279117 (+) | 491 | Protein_1336 | REP-associated tyrosine transposase | - |
| A6J44_RS08130 (A6J44_08045) | - | 1279154..1279420 (+) | 267 | Protein_1337 | transposase | - |
| A6J44_RS08140 (A6J44_08060) | - | 1279922..1280545 (+) | 624 | WP_003688215.1 | lytic transglycosylase domain-containing protein | - |
| A6J44_RS08145 (A6J44_08065) | - | 1280657..1282039 (+) | 1383 | WP_003688217.1 | MFS transporter | - |
| A6J44_RS08150 (A6J44_08070) | ssb | 1282043..1282567 (+) | 525 | WP_003695064.1 | single-stranded DNA-binding protein | Machinery gene |
| A6J44_RS08160 (A6J44_08080) | - | 1282940..1283863 (+) | 924 | WP_003695068.1 | DMT family transporter | - |
| A6J44_RS08165 (A6J44_08085) | fumC | 1283928..1285316 (-) | 1389 | WP_003695070.1 | class II fumarate hydratase | - |
| A6J44_RS08170 (A6J44_08090) | tkt | 1285460..1287439 (-) | 1980 | WP_003688227.1 | transketolase | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 19448.66 Da Isoelectric Point: 5.8313
>NTDB_id=222543 A6J44_RS08150 WP_003695064.1 1282043..1282567(+) (ssb) [Neisseria gonorrhoeae strain FDAARGOS_205]
MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRI
QSRKYQGKDGIERTAYDIVANEMKMLGGRNENSGGAPYDEGYGQSQEAYQRPAQQSRQPAPDAPSHPQEAPAAPRRQPVP
AAAPVEDIDDDIPF
MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRI
QSRKYQGKDGIERTAYDIVANEMKMLGGRNENSGGAPYDEGYGQSQEAYQRPAQQSRQPAPDAPSHPQEAPAAPRRQPVP
AAAPVEDIDDDIPF
Nucleotide
Download Length: 525 bp
>NTDB_id=222543 A6J44_RS08150 WP_003695064.1 1282043..1282567(+) (ssb) [Neisseria gonorrhoeae strain FDAARGOS_205]
ATGTCATTGAACAAAGTCATCCTTATCGGCCGCCTCGGACGCGATCCCGAAGTGCGCTATATGCCCAACGGCGAGGCAGT
GTGTAATTTCAGCGTCGCCACCAGCGAAACTTGGAACGACCGCAACGGCCAGCGCGTAGAGCGCACCGAATGGCACAACA
TCACGATGTACCGCAAACTGGCGGAAATTGCCGGGCAATACCTCAAAAAAGGCGGGCTGGTTTATCTGGAAGGCAGAATC
CAAAGCCGCAAATACCAAGGCAAAGACGGCATCGAACGCACCGCTTACGATATTGTCGCCAATGAAATGAAAATGTTGGG
CGGGCGCAATGAAAACAGCGGCGGCGCGCCTTACGATGAAGGTTACGGTCAGAGTCAGGAGGCTTACCAACGCCCCGCTC
AGCAAAGCCGGCAGCCCGCTCCCGACGCGCCGTCCCATCCCCAAGAAGCACCCGCCGCGCCGCGCCGCCAACCCGTGCCG
GCCGCCGCCCCGGTCGAGGACATTGACGACGACATCCCGTTCTGA
ATGTCATTGAACAAAGTCATCCTTATCGGCCGCCTCGGACGCGATCCCGAAGTGCGCTATATGCCCAACGGCGAGGCAGT
GTGTAATTTCAGCGTCGCCACCAGCGAAACTTGGAACGACCGCAACGGCCAGCGCGTAGAGCGCACCGAATGGCACAACA
TCACGATGTACCGCAAACTGGCGGAAATTGCCGGGCAATACCTCAAAAAAGGCGGGCTGGTTTATCTGGAAGGCAGAATC
CAAAGCCGCAAATACCAAGGCAAAGACGGCATCGAACGCACCGCTTACGATATTGTCGCCAATGAAATGAAAATGTTGGG
CGGGCGCAATGAAAACAGCGGCGGCGCGCCTTACGATGAAGGTTACGGTCAGAGTCAGGAGGCTTACCAACGCCCCGCTC
AGCAAAGCCGGCAGCCCGCTCCCGACGCGCCGTCCCATCCCCAAGAAGCACCCGCCGCGCCGCGCCGCCAACCCGTGCCG
GCCGCCGCCCCGGTCGAGGACATTGACGACGACATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| ssb | Neisseria meningitidis MC58 |
98.851 |
100 |
0.989 |
| ssb | Vibrio cholerae strain A1552 |
47.778 |
100 |
0.494 |
| ssb | Glaesserella parasuis strain SC1401 |
44.505 |
100 |
0.466 |