Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | A6J40_RS05175 | Genome accession | NZ_CP020412 |
| Coordinates | 1126986..1127420 (+) | Length | 144 a.a. |
| NCBI ID | WP_003632053.1 | Uniprot ID | D3HRR3 |
| Organism | Legionella longbeachae strain FDAARGOS_201 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1121986..1132420
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J40_RS05165 (A6J40_05135) | letS | 1122676..1125408 (+) | 2733 | WP_012979015.1 | two-component system sensor histidine kinase LetS | Regulator |
| A6J40_RS05170 (A6J40_05140) | - | 1125449..1126693 (+) | 1245 | WP_003632052.1 | 6-phosphofructokinase | - |
| A6J40_RS05175 (A6J40_05145) | pilA2 | 1126986..1127420 (+) | 435 | WP_003632053.1 | pilin | Machinery gene |
| A6J40_RS05180 (A6J40_05150) | - | 1127502..1127825 (+) | 324 | WP_003632054.1 | BolA family transcriptional regulator | - |
| A6J40_RS05185 (A6J40_05155) | - | 1128156..1129556 (+) | 1401 | WP_003632056.1 | APC family permease | - |
| A6J40_RS05195 (A6J40_05160) | - | 1129729..1130265 (-) | 537 | Protein_1010 | IS5 family transposase | - |
| A6J40_RS05200 (A6J40_05165) | - | 1130544..1130735 (-) | 192 | WP_012979013.1 | Trm112 family protein | - |
| A6J40_RS05205 (A6J40_05170) | tsaB | 1130745..1131395 (-) | 651 | WP_003632058.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
Sequence
Protein
Download Length: 144 a.a. Molecular weight: 14827.97 Da Isoelectric Point: 8.4860
>NTDB_id=222429 A6J40_RS05175 WP_003632053.1 1126986..1127420(+) (pilA2) [Legionella longbeachae strain FDAARGOS_201]
MKQKGFTLIELMIVVAIIGVLAAIAIPAYQDYVVRARVTEGLSLASAAKTTVSENASSGAAQLSQGWVAPAQTPIVNNIA
VDNGTGVITITYTALAQGITLTLTPRSGGNALQAGAPPTDAITWTCTVNNPATNNRYVPANCRS
MKQKGFTLIELMIVVAIIGVLAAIAIPAYQDYVVRARVTEGLSLASAAKTTVSENASSGAAQLSQGWVAPAQTPIVNNIA
VDNGTGVITITYTALAQGITLTLTPRSGGNALQAGAPPTDAITWTCTVNNPATNNRYVPANCRS
Nucleotide
Download Length: 435 bp
>NTDB_id=222429 A6J40_RS05175 WP_003632053.1 1126986..1127420(+) (pilA2) [Legionella longbeachae strain FDAARGOS_201]
ATGAAGCAAAAAGGTTTTACTTTAATTGAGTTGATGATAGTAGTGGCAATCATTGGTGTTCTCGCCGCAATAGCTATTCC
GGCCTATCAGGATTATGTAGTAAGAGCTCGCGTTACGGAAGGATTAAGCCTTGCCTCCGCAGCAAAAACTACAGTTTCTG
AAAACGCATCAAGCGGTGCTGCCCAATTAAGTCAAGGCTGGGTCGCACCTGCACAGACACCTATCGTTAACAATATCGCT
GTAGACAATGGGACTGGCGTAATTACAATAACTTACACTGCGTTAGCGCAGGGTATTACACTTACTTTAACGCCTCGATC
TGGCGGTAATGCTTTACAGGCCGGCGCTCCGCCAACCGATGCAATTACGTGGACTTGTACAGTTAATAATCCTGCTACAA
ATAATCGATATGTCCCTGCGAATTGCCGTTCTTAA
ATGAAGCAAAAAGGTTTTACTTTAATTGAGTTGATGATAGTAGTGGCAATCATTGGTGTTCTCGCCGCAATAGCTATTCC
GGCCTATCAGGATTATGTAGTAAGAGCTCGCGTTACGGAAGGATTAAGCCTTGCCTCCGCAGCAAAAACTACAGTTTCTG
AAAACGCATCAAGCGGTGCTGCCCAATTAAGTCAAGGCTGGGTCGCACCTGCACAGACACCTATCGTTAACAATATCGCT
GTAGACAATGGGACTGGCGTAATTACAATAACTTACACTGCGTTAGCGCAGGGTATTACACTTACTTTAACGCCTCGATC
TGGCGGTAATGCTTTACAGGCCGGCGCTCCGCCAACCGATGCAATTACGTGGACTTGTACAGTTAATAATCCTGCTACAA
ATAATCGATATGTCCCTGCGAATTGCCGTTCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila strain ERS1305867 |
57.143 |
100 |
0.583 |
| pilA2 | Legionella pneumophila str. Paris |
57.143 |
100 |
0.583 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
52.229 |
100 |
0.569 |
| comP | Acinetobacter baylyi ADP1 |
47.945 |
100 |
0.486 |
| pilA/pilA1 | Eikenella corrodens VA1 |
38.415 |
100 |
0.438 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
42.029 |
95.833 |
0.403 |
| pilE | Neisseria gonorrhoeae MS11 |
36.25 |
100 |
0.403 |
| pilA | Pseudomonas aeruginosa PAK |
35.185 |
100 |
0.396 |
| pilA | Acinetobacter baumannii strain A118 |
38.194 |
100 |
0.382 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
36.806 |
100 |
0.368 |