Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Machinery gene
Locus tag   A6J53_RS09715 Genome accession   NZ_CP020401
Coordinates   1634039..1634662 (+) Length   207 a.a.
NCBI ID   WP_002256546.1    Uniprot ID   -
Organism   Neisseria meningitidis strain FDAARGOS_214     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1629039..1639662
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J53_RS09685 (A6J53_09440) - 1629573..1630538 (-) 966 Protein_1578 IS30-like element IS1655 family transposase -
  A6J53_RS09695 (A6J53_09445) - 1630893..1631480 (-) 588 WP_002223431.1 superoxide dismutase -
  A6J53_RS09705 (A6J53_09455) dnaB 1631642..1633048 (+) 1407 WP_002238995.1 replicative DNA helicase -
  A6J53_RS09710 (A6J53_09460) pilH 1633350..1634015 (+) 666 WP_002256545.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  A6J53_RS09715 (A6J53_09465) pilV 1634039..1634662 (+) 624 WP_002256546.1 type IV pilus modification protein PilV Machinery gene
  A6J53_RS09720 (A6J53_09470) pilJ 1634659..1635603 (+) 945 WP_002256547.1 PilW family protein Machinery gene
  A6J53_RS09725 (A6J53_09475) pilK 1635582..1636178 (+) 597 WP_002256548.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  A6J53_RS09730 (A6J53_09480) pilL 1636183..1636680 (+) 498 WP_002251253.1 PilX family type IV pilin Machinery gene

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 22297.24 Da        Isoelectric Point: 4.9679

>NTDB_id=222177 A6J53_RS09715 WP_002256546.1 1634039..1634662(+) (pilV) [Neisseria meningitidis strain FDAARGOS_214]
MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYMGNNTLSHTLSAVDGEFTIDAIKTKTQLAEAQLKRFSYELKNALPDAAAIHYAVCKDSSGAAPTLSAGGAFSQNCD
GSANGDTLIKVLWVNDSAGDSDIARTNLETNGNNIVYTYQARVGGRE

Nucleotide


Download         Length: 624 bp        

>NTDB_id=222177 A6J53_RS09715 WP_002256546.1 1634039..1634662(+) (pilV) [Neisseria meningitidis strain FDAARGOS_214]
ATGAAGAATAATGATTGCTTCCGCCTGAAAAATCCCCAGTCCGGTATGGCGCTGATAGAAGTCTTGGTTGCCATGCTCGT
TCTGACCATCGGTATTTTGGCACTATTGTCCGTACAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCGGAGACGCAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAAGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACATGGGAAACAATACACTATCGCATACACTATCAGCTGTGGATGGTGAGTTTACGATTGATGCCATAAA
AACTAAGACGCAGTTGGCAGAGGCACAATTGAAGAGATTTAGTTATGAGCTGAAAAATGCCTTGCCGGATGCGGCAGCCA
TCCATTACGCCGTCTGCAAGGATTCGTCGGGTGCTGCGCCGACATTGTCCGCCGGCGGTGCTTTTTCTCAAAATTGCGAT
GGTAGTGCAAATGGGGATACTTTGATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATCGCCCGTACGAA
TCTTGAGACGAACGGCAACAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGGGAATGA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

92.271

100

0.923
  pilI Neisseria gonorrhoeae MS11

81.159

100

0.812
  pilV Neisseria gonorrhoeae MS11

81.159

100

0.812

Multiple sequence alignment