Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | A6J53_RS09710 | Genome accession | NZ_CP020401 |
| Coordinates | 1633350..1634015 (+) | Length | 221 a.a. |
| NCBI ID | WP_002256545.1 | Uniprot ID | A0A378VS27 |
| Organism | Neisseria meningitidis strain FDAARGOS_214 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1628350..1639015
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J53_RS09685 (A6J53_09440) | - | 1629573..1630538 (-) | 966 | Protein_1578 | IS30-like element IS1655 family transposase | - |
| A6J53_RS09695 (A6J53_09445) | - | 1630893..1631480 (-) | 588 | WP_002223431.1 | superoxide dismutase | - |
| A6J53_RS09705 (A6J53_09455) | dnaB | 1631642..1633048 (+) | 1407 | WP_002238995.1 | replicative DNA helicase | - |
| A6J53_RS09710 (A6J53_09460) | pilH | 1633350..1634015 (+) | 666 | WP_002256545.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| A6J53_RS09715 (A6J53_09465) | pilV | 1634039..1634662 (+) | 624 | WP_002256546.1 | type IV pilus modification protein PilV | Machinery gene |
| A6J53_RS09720 (A6J53_09470) | pilJ | 1634659..1635603 (+) | 945 | WP_002256547.1 | PilW family protein | Machinery gene |
| A6J53_RS09725 (A6J53_09475) | pilK | 1635582..1636178 (+) | 597 | WP_002256548.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| A6J53_RS09730 (A6J53_09480) | pilL | 1636183..1636680 (+) | 498 | WP_002251253.1 | PilX family type IV pilin | Machinery gene |
Sequence
Protein
Download Length: 221 a.a. Molecular weight: 24595.08 Da Isoelectric Point: 9.7531
>NTDB_id=222176 A6J53_RS09710 WP_002256545.1 1633350..1634015(+) (pilH) [Neisseria meningitidis strain FDAARGOS_214]
MCTRKQQGFTLTELLIVMVIAAIMAMIALPNMSQWIASRRIASHAERIANLLRFSRGEAVRLNLPVYICPVQVKKDGTPN
NKCDSGKKGQGMLAFGDKNSNKGYDGDAADVFLRSVVLNDTDDSRINYAFNHIAFGSSQPTADRVVWTFNQNGTFGYTKD
QHLTSKSSFFYSDGYIQIVLTDARAVSDADKKFRSAVVLINSSGRVEVCPRGDRRTMCQYK
MCTRKQQGFTLTELLIVMVIAAIMAMIALPNMSQWIASRRIASHAERIANLLRFSRGEAVRLNLPVYICPVQVKKDGTPN
NKCDSGKKGQGMLAFGDKNSNKGYDGDAADVFLRSVVLNDTDDSRINYAFNHIAFGSSQPTADRVVWTFNQNGTFGYTKD
QHLTSKSSFFYSDGYIQIVLTDARAVSDADKKFRSAVVLINSSGRVEVCPRGDRRTMCQYK
Nucleotide
Download Length: 666 bp
>NTDB_id=222176 A6J53_RS09710 WP_002256545.1 1633350..1634015(+) (pilH) [Neisseria meningitidis strain FDAARGOS_214]
ATGTGTACACGAAAACAACAAGGTTTCACGCTAACAGAGCTGCTCATCGTGATGGTCATTGCAGCCATTATGGCGATGAT
AGCCCTCCCCAATATGAGCCAATGGATTGCATCCCGCCGCATTGCCAGTCATGCGGAGCGGATTGCCAACCTTTTGCGTT
TCTCCAGGGGCGAAGCCGTCCGGCTCAATCTTCCTGTCTATATCTGTCCTGTTCAAGTTAAAAAAGACGGTACGCCCAAC
AATAAATGTGACTCCGGCAAGAAGGGGCAGGGAATGTTGGCTTTCGGCGACAAAAACAGCAATAAGGGATATGACGGCGA
TGCGGCGGATGTTTTCCTCCGCAGCGTGGTGTTGAATGATACCGACGACAGCCGGATTAATTATGCCTTCAACCATATCG
CTTTCGGTTCGTCTCAGCCGACCGCCGACCGTGTAGTTTGGACATTCAATCAAAACGGGACGTTCGGTTATACGAAAGAC
CAGCATCTTACAAGCAAATCCAGCTTTTTTTATTCCGACGGTTATATCCAAATCGTGCTGACAGATGCGAGAGCAGTTTC
AGATGCCGATAAGAAATTCCGTTCGGCGGTGGTTTTGATTAACAGCAGCGGCAGGGTCGAAGTTTGCCCTAGGGGTGATC
GGCGTACTATGTGCCAGTATAAATAA
ATGTGTACACGAAAACAACAAGGTTTCACGCTAACAGAGCTGCTCATCGTGATGGTCATTGCAGCCATTATGGCGATGAT
AGCCCTCCCCAATATGAGCCAATGGATTGCATCCCGCCGCATTGCCAGTCATGCGGAGCGGATTGCCAACCTTTTGCGTT
TCTCCAGGGGCGAAGCCGTCCGGCTCAATCTTCCTGTCTATATCTGTCCTGTTCAAGTTAAAAAAGACGGTACGCCCAAC
AATAAATGTGACTCCGGCAAGAAGGGGCAGGGAATGTTGGCTTTCGGCGACAAAAACAGCAATAAGGGATATGACGGCGA
TGCGGCGGATGTTTTCCTCCGCAGCGTGGTGTTGAATGATACCGACGACAGCCGGATTAATTATGCCTTCAACCATATCG
CTTTCGGTTCGTCTCAGCCGACCGCCGACCGTGTAGTTTGGACATTCAATCAAAACGGGACGTTCGGTTATACGAAAGAC
CAGCATCTTACAAGCAAATCCAGCTTTTTTTATTCCGACGGTTATATCCAAATCGTGCTGACAGATGCGAGAGCAGTTTC
AGATGCCGATAAGAAATTCCGTTCGGCGGTGGTTTTGATTAACAGCAGCGGCAGGGTCGAAGTTTGCCCTAGGGGTGATC
GGCGTACTATGTGCCAGTATAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Neisseria gonorrhoeae MS11 |
85.909 |
99.548 |
0.855 |