Detailed information NTG0222164

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: C2H94_RS03230
• Genome accession: NZ_CP026034
• Coordinates: 549829..550434 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain PK5_52
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 544829..555434

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2H94_RS03200 (C2H94_03160)	-	545642..546031 (+)	390	WP_031315243.1	TIGR04086 family membrane protein	-
C2H94_RS03205 (C2H94_03165)	yajC	546088..546354 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
C2H94_RS03210 (C2H94_03170)	tgt	546391..547536 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
C2H94_RS03215 (C2H94_03175)	queA	547563..548591 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
C2H94_RS03220 (C2H94_03180)	yrzS	548621..548821 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
C2H94_RS03225 (C2H94_03185)	ruvB	548814..549818 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
C2H94_RS03230 (C2H94_03190)	ruvA	549829..550434 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
C2H94_RS03235 (C2H94_03195)	bofC	550573..551085 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
C2H94_RS03240 (C2H94_03200)	csbX	551133..552440 (-)	1308	WP_038829637.1	MFS transporter	-
C2H94_RS03245 (C2H94_03205)	iolG	552511..553536 (-)	1026	WP_070547599.1	inositol 2-dehydrogenase	-
C2H94_RS03250 (C2H94_03210)	yrzF	553774..554421 (+)	648	WP_024572252.1	phosphotransferase	-
C2H94_RS03255	-	554467..554589 (-)	123	WP_003229707.1	hypothetical protein	-
C2H94_RS03260	-	554793..555119 (+)	327	WP_249849671.1	DUF5412 family protein	-
C2H94_RS03265 (C2H94_03220)	-	555126..555266 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=222164 C2H94_RS03230 WP_003229717.1 549829..550434(-) (ruvA) [Bacillus subtilis strain PK5_52]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=222164 C2H94_RS03230 WP_003229717.1 549829..550434(-) (ruvA) [Bacillus subtilis strain PK5_52]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408