Detailed information NTG0022054

Bioinformatically predicted

Overview

• Name: ctsF
• Type: Machinery gene
• Locus tag: CJE_RS08155
• Genome accession: NC_003912
• Coordinates: 1542540..1543721 (-)
• Length: 393 a.a.
• NCBI ID: WP_002867247.1
• Uniprot ID: -
• Organism: Campylobacter jejuni RM1221
• Function: type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1537540..1548721

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJE_RS08125 (CJE1637)	-	1538084..1538425 (+)	342	WP_002867250.1	hypothetical protein	-
CJE_RS08130 (CJE1638)	flgM	1538488..1538685 (+)	198	WP_002867249.1	flagellar biosynthesis anti-sigma factor FlgM	-
CJE_RS08135 (CJE1639)	-	1538728..1539162 (+)	435	WP_002779263.1	flagellar protein FlgN	-
CJE_RS08140 (CJE1640)	flgK	1539172..1540998 (+)	1827	WP_002867248.1	flagellar hook-associated protein FlgK	-
CJE_RS08145 (CJE1641)	-	1541015..1541779 (+)	765	WP_011049985.1	TIGR02757 family protein	-
CJE_RS08150 (CJE1642)	-	1541783..1542547 (+)	765	WP_002855821.1	TSUP family transporter	-
CJE_RS08155 (CJE1643)	ctsF	1542540..1543721 (-)	1182	WP_002867247.1	type II secretion system F family protein	Machinery gene
CJE_RS08160 (CJE1644)	ctsE	1543718..1545277 (-)	1560	WP_002867246.1	GspE/PulE family protein	Machinery gene
CJE_RS08165 (CJE1645)	ctsX	1545267..1545854 (-)	588	WP_002867245.1	hypothetical protein	Machinery gene
CJE_RS08170 (CJE1646)	ctsP	1545858..1546466 (-)	609	WP_002851464.1	ATP-binding protein	Machinery gene
CJE_RS08175 (CJE1647)	ctsD	1546459..1547871 (-)	1413	WP_011049986.1	pilus (MSHA type) biogenesis protein MshL	Machinery gene
CJE_RS08180 (CJE1648)	ctsR	1547849..1548160 (-)	312	WP_002855438.1	hypothetical protein	Machinery gene

Sequence

Protein

• Length: 393 a.a.
• Molecular weight: 45750.33 Da
• Isoelectric Point: 9.0938

>NTDB_id=22054 CJE_RS08155 WP_002867247.1 1542540..1543721(-) (ctsF) [Campylobacter jejuni RM1221]
MKFYEVEFLKNNQNYTKTIKAENLNTAQAKALSKNWKIIDIKEIQKSNFQRLKDENFILFFKELALLCEVGLSVQEAIRE
LYLMHSCKIMKKILDNLILAQNLNQAFENANFGLNRAELALIKTAEKTGKISEVFSQISKLREKSLESQKQLKKAFRYPT
LVFLSIIGAFLFLMLFVVPNFKDLFENLGASLPFITHVMLEIYNFLDDYGIFCIFLFVVFIVMLILAYKNFHSFAFSCDF
LFLKIPLISRLIIYNQNYYFFMVFSLLLKNGISISKAFDLAIIGLENKFLIFQYKKLFSFIDSGLELSQAFKKIDIFDSL
VFSMLSVAMKSGRLEVLSEEIAKYYQQKSENLMDRFLVFLEPMMTLFVAFLVLFLALGIFLPMWELSSGVNFN

Nucleotide

• Length: 1182 bp

>NTDB_id=22054 CJE_RS08155 WP_002867247.1 1542540..1543721(-) (ctsF) [Campylobacter jejuni RM1221]
ATGAAATTTTATGAAGTGGAATTTCTTAAAAACAATCAAAATTATACAAAAACTATAAAAGCTGAAAATTTAAATACAGC
ACAAGCAAAAGCCTTATCAAAGAATTGGAAAATCATTGATATAAAAGAAATTCAAAAATCTAATTTTCAGAGATTAAAAG
ATGAAAATTTTATACTCTTTTTTAAAGAGCTAGCTTTGTTGTGTGAAGTTGGATTAAGTGTTCAAGAAGCGATTAGAGAA
TTATATCTTATGCACTCTTGCAAGATTATGAAAAAAATATTAGACAATTTAATTTTAGCCCAAAATCTAAATCAAGCTTT
TGAAAATGCTAATTTTGGATTAAATCGTGCGGAGTTAGCTTTGATTAAAACGGCTGAAAAGACAGGAAAAATCAGTGAAG
TGTTTAGTCAAATTTCTAAACTTCGAGAAAAAAGCTTAGAGAGTCAAAAACAATTGAAAAAGGCTTTTAGATATCCTACT
TTGGTTTTTTTAAGTATTATCGGAGCATTTTTGTTTTTAATGCTTTTTGTAGTGCCTAATTTTAAAGATTTATTTGAAAA
TTTAGGCGCGAGTTTGCCTTTTATCACGCATGTAATGTTAGAAATTTATAATTTTTTAGATGACTATGGAATTTTTTGCA
TATTTTTGTTTGTTGTTTTTATTGTTATGCTTATTTTAGCTTATAAAAATTTTCATTCTTTTGCTTTTTCTTGCGATTTT
TTATTTTTAAAAATACCTTTGATTTCTCGTTTGATTATTTATAATCAAAATTATTATTTTTTTATGGTTTTTTCTTTGCT
TTTAAAAAATGGAATTTCAATATCTAAAGCTTTTGATTTAGCTATTATAGGGCTTGAAAATAAATTTTTAATTTTTCAGT
ATAAAAAACTTTTTAGTTTTATAGATTCTGGTCTTGAGTTAAGTCAGGCTTTTAAAAAGATTGATATTTTTGATTCTTTG
GTATTTTCTATGCTCAGTGTTGCGATGAAAAGTGGAAGACTTGAAGTGTTAAGTGAAGAAATTGCCAAATATTATCAACA
AAAAAGTGAAAATTTAATGGATAGATTTTTGGTTTTTTTAGAGCCTATGATGACTTTATTTGTGGCGTTTTTAGTTTTGT
TTTTGGCTTTAGGTATATTTTTACCTATGTGGGAGCTTAGCTCAGGGGTCAATTTTAACTAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein F (T2SSF) (60-179)

• Type II secretion system (T2SS), protein F (T2SSF) (261-382)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ctsF	Campylobacter jejuni subsp. jejuni 81-176	98.98	99.746	0.987