Detailed information NTG0220092

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: OTEC02_RS10290
• Genome accession: NZ_CP020015
• Coordinates: 2183787..2184539 (-)
• Length: 250 a.a.
• NCBI ID: WP_081174157.1
• Uniprot ID: -
• Organism: Acinetobacter lactucae strain OTEC-02
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2178787..2189539

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OTEC02_RS10260 (OTEC02_10260)	-	2179095..2179535 (-)	441	WP_081174154.1	SRPBCC family protein	-
OTEC02_RS10265 (OTEC02_10265)	tadA	2179606..2180109 (-)	504	WP_061875520.1	tRNA adenosine(34) deaminase TadA	-
OTEC02_RS10270 (OTEC02_10270)	-	2180116..2181240 (-)	1125	WP_080648682.1	enoyl-CoA hydratase/isomerase family protein	-
OTEC02_RS10275 (OTEC02_10275)	ung	2181237..2181950 (-)	714	WP_016145102.1	uracil-DNA glycosylase	-
OTEC02_RS10280 (OTEC02_10280)	-	2182004..2182600 (-)	597	WP_016145101.1	6-pyruvoyl trahydropterin synthase family protein	-
OTEC02_RS10285 (OTEC02_10285)	gspK	2182828..2183787 (-)	960	WP_081174155.1	type II secretion system minor pseudopilin GspK	-
OTEC02_RS10290 (OTEC02_10290)	xcpW	2183787..2184539 (-)	753	WP_081174157.1	type II secretion system minor pseudopilin GspJ	Machinery gene
OTEC02_RS10295 (OTEC02_10295)	xcpV	2184539..2184919 (-)	381	WP_081174159.1	type II secretion system minor pseudopilin GspI	Machinery gene
OTEC02_RS10300 (OTEC02_10300)	-	2184909..2185463 (-)	555	WP_016145097.1	type II secretion system protein	-
OTEC02_RS10305 (OTEC02_10305)	-	2185470..2186078 (-)	609	WP_014206595.1	TetR/AcrR family transcriptional regulator	-
OTEC02_RS10310 (OTEC02_10310)	-	2186115..2186888 (-)	774	WP_057106320.1	TatD family hydrolase	-
OTEC02_RS10315 (OTEC02_10315)	-	2186906..2187247 (-)	342	WP_081174161.1	PilZ domain-containing protein	-
OTEC02_RS10320 (OTEC02_10320)	-	2187258..2188238 (-)	981	WP_081174163.1	DNA polymerase III subunit delta'	-
OTEC02_RS10325 (OTEC02_10325)	kdsB	2188252..2189013 (-)	762	WP_062848588.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 250 a.a.
• Molecular weight: 28563.63 Da
• Isoelectric Point: 9.1396

>NTDB_id=220092 OTEC02_RS10290 WP_081174157.1 2183787..2184539(-) (xcpW) [Acinetobacter lactucae strain OTEC-02]
MINNKYSFRRETSSLAARSEQMMRGHSEQSSSSCAQTKLRFVNPRSGFTLVELLVAIAIFAILSLLGWKVFDYLLKVRDR
NAQHEVQLFELQDAYQQVLRDSLQIIPLSANQGGQLHPALELDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKLY
RLKYSNLNTSNKEQPLSSTLLSQVEQFEVIVLTPQEVTRWPEINLDPTKPEEFRKLPKGVKIQLTVAGVSYEWIYSLNQG
NLSLSKEGGV

Nucleotide

• Length: 753 bp

>NTDB_id=220092 OTEC02_RS10290 WP_081174157.1 2183787..2184539(-) (xcpW) [Acinetobacter lactucae strain OTEC-02]
ATGATAAATAATAAATATAGCTTCCGAAGAGAAACTTCAAGTCTTGCAGCACGATCGGAGCAGATGATGAGGGGTCACTC
CGAGCAAAGCTCTTCGTCTTGCGCTCAGACAAAGCTTCGCTTTGTTAATCCTCGCTCAGGATTTACTTTAGTTGAGCTTT
TGGTTGCAATTGCAATTTTTGCCATTTTATCTTTGTTGGGGTGGAAGGTTTTTGATTATTTATTAAAGGTCCGAGATCGT
AATGCTCAACATGAAGTACAGTTATTTGAATTACAAGATGCTTATCAGCAAGTTTTACGGGATTCATTGCAAATTATACC
GTTATCGGCTAATCAAGGCGGACAGTTACATCCAGCTCTAGAGCTTGATAACCAAGTTCTTCGCTTTAGTAAAGCTGGTG
TTACTGATCCCTTAAAGCAAGGATTATCACCTTTTGAGCGTATTGAATATCGATATGATCCTGATCAAAAAAAGCTTTAT
CGTCTTAAATATAGTAATTTAAATACTTCAAACAAAGAGCAACCTTTATCAAGTACGCTGTTGAGCCAAGTTGAACAATT
TGAAGTTATAGTGTTGACACCGCAGGAAGTGACAAGATGGCCAGAGATTAATCTTGATCCCACCAAACCTGAAGAGTTTA
GAAAGTTACCGAAAGGAGTAAAAATACAACTCACCGTTGCAGGAGTAAGTTATGAGTGGATTTATAGCTTAAATCAGGGG
AATTTATCTCTCTCCAAAGAAGGAGGAGTATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (100-229)

• Prokaryotic N-terminal methylation motif (N_methyl) (44-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	76.8	100	0.768