Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   B2G84_RS04735 Genome accession   NZ_CP019979
Coordinates   865923..866870 (+) Length   315 a.a.
NCBI ID   WP_000903642.1    Uniprot ID   A0AAV3JK20
Organism   Streptococcus agalactiae strain Sag158     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 860923..871870
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B2G84_RS04705 (B2G84_04705) - 861272..861952 (+) 681 WP_079218668.1 VIT family protein -
  B2G84_RS04710 (B2G84_04710) - 862103..862804 (+) 702 WP_001263956.1 glucosamine-6-phosphate deaminase -
  B2G84_RS04715 (B2G84_04715) - 862876..863832 (-) 957 WP_000523788.1 glutathione S-transferase family protein -
  B2G84_RS04720 (B2G84_04720) - 863928..864647 (+) 720 WP_001234957.1 16S rRNA pseudouridine(516) synthase -
  B2G84_RS04730 (B2G84_04730) - 864720..865871 (+) 1152 WP_001086200.1 MFS transporter -
  B2G84_RS04735 (B2G84_04735) coiA 865923..866870 (+) 948 WP_000903642.1 competence protein CoiA Machinery gene
  B2G84_RS04740 (B2G84_04740) pepF 866886..868691 (+) 1806 WP_001282902.1 oligoendopeptidase F Regulator
  B2G84_RS04745 (B2G84_04745) - 868886..869512 (+) 627 WP_000736935.1 HAD hydrolase-like protein -
  B2G84_RS04750 (B2G84_04750) - 869556..870361 (+) 806 WP_088181596.1 IS5-like element IS1381A family transposase -
  B2G84_RS04755 (B2G84_04755) - 870447..871154 (+) 708 WP_000250853.1 O-methyltransferase -

Sequence


Protein


Download         Length: 315 a.a.        Molecular weight: 37807.57 Da        Isoelectric Point: 9.5842

>NTDB_id=219464 B2G84_RS04735 WP_000903642.1 865923..866870(+) (coiA) [Streptococcus agalactiae strain Sag158]
MLIAKDKQGNLINLLESHPGKGQYFCPTCCSAVRLKAGRIMRRHFAHISLKNCQFYHENESNEHLQLKAKLYMSLSRENE
TMLEHHLPEINQIADLFVNETLALEVQCSRLSEQRLRERTKAYLQADFQVRWLLGEKLWLKHRLTNLHKQFLQFSQSIGF
HIWELDLRLEVLRLKYLIYEDLRGHVYYLSKTCPLSGDVLAFLKWPYQSKNLNFYKVKQDRNIRDYVRQQLRYGNQFWLR
KQEKAYLSGQNLLTQELMMFFPQIQPPRVDTDFCQITNSLTSFYQNFTNYYQKNKNNLDQTLYPPVFYDKIVTKN

Nucleotide


Download         Length: 948 bp        

>NTDB_id=219464 B2G84_RS04735 WP_000903642.1 865923..866870(+) (coiA) [Streptococcus agalactiae strain Sag158]
ATGTTAATTGCTAAAGACAAACAAGGAAATTTAATTAATCTACTCGAGTCTCATCCGGGAAAGGGACAGTATTTTTGTCC
AACTTGTTGTTCAGCTGTAAGGTTAAAGGCAGGTCGAATCATGAGAAGACACTTTGCACATATTAGTCTAAAAAATTGTC
AGTTTTATCATGAAAATGAGTCTAATGAGCACTTGCAATTAAAAGCAAAGTTATATATGAGTTTAAGTAGAGAGAATGAA
ACTATGCTCGAGCATCATTTGCCAGAAATTAATCAGATTGCAGATTTATTTGTGAATGAGACATTGGCTTTAGAAGTTCA
GTGTAGCCGACTATCAGAGCAGCGACTCAGGGAGCGAACAAAAGCATATCTACAGGCAGACTTTCAAGTGAGATGGTTAC
TAGGGGAAAAACTCTGGTTAAAGCATCGTTTAACAAATCTACATAAACAATTTTTACAATTTTCTCAAAGTATCGGATTT
CATATTTGGGAGTTAGATTTGAGGTTAGAAGTACTGAGACTAAAATATTTGATTTACGAAGATTTACGCGGACATGTCTA
TTACTTAAGTAAAACTTGCCCTCTTAGTGGAGACGTTCTAGCATTTTTGAAGTGGCCATACCAATCAAAAAATCTAAATT
TTTATAAGGTTAAACAAGACAGAAATATCAGAGATTATGTGCGTCAGCAGTTACGCTATGGCAATCAATTTTGGTTACGA
AAACAAGAAAAGGCCTACCTTTCTGGTCAGAATCTATTGACCCAAGAGCTAATGATGTTTTTTCCTCAAATACAGCCACC
ACGTGTAGATACTGATTTTTGTCAAATAACAAATTCTCTAACATCGTTTTATCAGAATTTTACAAATTATTATCAAAAAA
ATAAGAATAACTTAGACCAAACACTTTATCCCCCTGTATTTTATGATAAAATAGTCACTAAGAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Streptococcus pneumoniae TIGR4

49.051

100

0.492

  coiA Streptococcus pneumoniae Rx1

49.051

100

0.492

  coiA Streptococcus pneumoniae D39

49.051

100

0.492

  coiA Streptococcus pneumoniae R6

49.051

100

0.492

  coiA Streptococcus mitis NCTC 12261

49.051

100

0.492

  coiA Lactococcus lactis subsp. cremoris KW2

40.062

100

0.41


Multiple sequence alignment