Detailed information NTG0218974

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: SPSF3K_RS06780
• Genome accession: NZ_CP025420
• Coordinates: 1348185..1349255 (+)
• Length: 356 a.a.
• NCBI ID: WP_003106892.1
• Uniprot ID: A0ABP2SZK4
• Organism: Streptococcus parauberis strain SPOF3K
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1343185..1354255

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPSF3K_RS06765 (SPSF3K_01375)	comGA/cglA/cilD	1343313..1343717 (+)	405	WP_003108459.1	ATPase, T2SS/T4P/T4SS family	Machinery gene
SPSF3K_RS06770 (SPSF3K_01376)	-	1343783..1344781 (+)	999	WP_100190737.1	IS5 family transposase	-
SPSF3K_RS06775 (SPSF3K_01377)	-	1345639..1347771 (+)	2133	WP_177216636.1	N-acetylmuramoyl-L-alanine amidase family protein	-
SPSF3K_RS06780 (SPSF3K_01378)	xerS	1348185..1349255 (+)	1071	WP_003106892.1	tyrosine recombinase XerS	Machinery gene
SPSF3K_RS06785 (SPSF3K_01379)	-	1349328..1350500 (-)	1173	WP_003108456.1	NADH-dependent flavin oxidoreductase	-
SPSF3K_RS06790 (SPSF3K_01380)	-	1350579..1351199 (-)	621	WP_003108455.1	hypothetical protein	-
SPSF3K_RS06795 (SPSF3K_01381)	-	1351199..1351534 (-)	336	WP_003103364.1	MazG nucleotide pyrophosphohydrolase domain-containing protein	-
SPSF3K_RS06800 (SPSF3K_01382)	-	1351773..1352351 (-)	579	WP_003108454.1	NUDIX hydrolase	-
SPSF3K_RS06805 (SPSF3K_01383)	-	1352502..1353449 (-)	948	WP_003108453.1	sensor histidine kinase	-
SPSF3K_RS06810 (SPSF3K_01384)	braR	1353446..1354111 (-)	666	WP_003108452.1	response regulator transcription factor	Regulator

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41517.64 Da
• Isoelectric Point: 9.6821

>NTDB_id=218974 SPSF3K_RS06780 WP_003106892.1 1348185..1349255(+) (xerS) [Streptococcus parauberis strain SPOF3K]
MRRELLLKKIEDYKSIMPWYVLDYYQSKLSVPYSFTTLYEYLKEYKRFFDWLIDADISNATKIADIDLSTLEHLTKKDME
AFVLYLRERPSLNTYSTKSGVSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETMEFLEYVDNEYENLLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDLNLKMMVIEVTRKGGKRDS
VNVAGFAKPYIENYLAIRKNRYKAEKQDLAFFLTEYRGVPNRIDASSIEKMVAKYSQDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDKL

Nucleotide

• Length: 1071 bp

>NTDB_id=218974 SPSF3K_RS06780 WP_003106892.1 1348185..1349255(+) (xerS) [Streptococcus parauberis strain SPOF3K]
ATGAGACGTGAATTACTTTTAAAAAAAATTGAAGACTATAAATCAATTATGCCTTGGTATGTTTTAGATTATTATCAATC
TAAATTGTCAGTGCCATATAGTTTTACGACTTTATATGAATATCTTAAGGAATATAAACGTTTCTTTGATTGGTTAATTG
ACGCTGATATCTCAAATGCTACTAAAATTGCTGATATCGATTTATCTACTTTGGAACATCTGACTAAGAAAGATATGGAG
GCTTTTGTTCTTTATTTACGTGAACGTCCTTCTCTTAATACATACTCAACTAAGTCTGGTGTCTCACAAACGACCATTAA
CAGAACTTTGTCTGCCTTATCCAGTCTCTACAAGTATTTGACTGAGGAGGTTGAAAATGACCAAGGTGAACCTTATTTCT
ACAGAAATGTCATGAAAAAGGTCTCTACTAAGAAGAAAAAAGAAACTTTAGCCTCACGGGCTGAAAATATTAAGCAAAAA
CTTTTCTTAGGTGACGAAACCATGGAATTTCTGGAGTATGTTGATAATGAGTACGAGAATTTACTGTCAAATCGAGCTAA
ATCATCTTTCCGAAAAAATAAGGAACGTGATCTTGCTATTATTGCGCTTCTTCTTGCTTCTGGCGTTCGACTCTCAGAAG
CTGTCAACCTTGATTTAAAAGACTTGAATCTAAAAATGATGGTCATCGAGGTAACGCGTAAGGGTGGAAAACGTGATTCT
GTCAACGTTGCTGGCTTTGCCAAACCATATATCGAGAATTATTTAGCCATTCGCAAGAACCGGTACAAGGCGGAAAAACA
AGATCTTGCTTTCTTTCTAACTGAGTATCGCGGTGTTCCTAATCGAATTGATGCCTCTTCTATAGAAAAAATGGTTGCTA
AGTACTCACAAGATTTCAAAATCCGGGTTACGCCCCATAAATTACGCCATACACTGGCTACCAGACTTTATGATGCAACC
AAGTCTCAGGTCTTAGTTAGTCACCAATTAGGCCATGCCTCTACACAGGTTACTGACCTTTATACCCATATCGTCAATGA
CGAACAAAAAAATGCCTTAGATAAACTATAA

Domains

Predicted by InterProScan.

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

• Phage integrase family (Phage_integrase) (176-344)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	83.427	100	0.834