Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   B1761_RS02730 Genome accession   NZ_CP019935
Coordinates   507848..508933 (-) Length   361 a.a.
NCBI ID   WP_011226304.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain APC151     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 502848..513933
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B1761_RS02700 (B1761_02725) - 503213..504028 (-) 816 WP_014608539.1 Cof-type HAD-IIB family hydrolase -
  B1761_RS02705 (B1761_02730) - 504021..504815 (-) 795 WP_011681412.1 HAD-IIB family hydrolase -
  B1761_RS02710 (B1761_02735) - 504999..505376 (+) 378 WP_011681413.1 GntR family transcriptional regulator -
  B1761_RS02715 (B1761_02740) - 505381..506079 (+) 699 WP_014608540.1 ABC transporter ATP-binding protein -
  B1761_RS02720 (B1761_02745) - 506091..506876 (+) 786 WP_002951425.1 hypothetical protein -
  B1761_RS02725 (B1761_02750) amiF 506926..507855 (-) 930 WP_002951426.1 ATP-binding cassette domain-containing protein Regulator
  B1761_RS02730 (B1761_02755) amiE 507848..508933 (-) 1086 WP_011226304.1 ABC transporter ATP-binding protein Regulator
  B1761_RS02735 (B1761_02760) amiD 508943..509869 (-) 927 WP_002946409.1 oligopeptide ABC transporter permease OppC Regulator
  B1761_RS02740 (B1761_02765) amiC 509869..511362 (-) 1494 WP_014608541.1 ABC transporter permease Regulator
  B1761_RS02745 (B1761_02770) amiA 511424..513391 (-) 1968 WP_014621802.1 peptide ABC transporter substrate-binding protein Regulator

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 39864.62 Da        Isoelectric Point: 4.7435

>NTDB_id=218910 B1761_RS02730 WP_011226304.1 507848..508933(-) (amiE) [Streptococcus thermophilus strain APC151]
MTENKNVILSARDIVVEFDVRDRVLTAIRGVSLDLVEGEVLALVGESGSGKSVLTKTFTGMLEENGRVASGSIDYRGKDL
TKFKSHQDWAAIRGAKIATIFQDPMTSLNPIKTIGSQIIEVIVKHQGKTAKEAKKMAIDYMDKVGIPDAEKRFNEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLKEEYGFSVIFITHDLGVVASIADKVAVMYAGEIIE
YATVEEIFYEPCHPYTWSLLSSLPQLADDNGKLFSIPGTPPSLYTPVVGDAFALRSDYALQIDFEEKAPQFQVSDTHWAK
TWLLHEDAPKVDKPAVIQNLHEKILANMGFAHLGDEEEGNA

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=218910 B1761_RS02730 WP_011226304.1 507848..508933(-) (amiE) [Streptococcus thermophilus strain APC151]
ATGACAGAAAATAAAAATGTAATATTATCGGCTCGCGATATCGTCGTGGAATTTGACGTTCGTGACCGTGTTTTGACAGC
TATTCGAGGGGTTTCTCTTGATTTAGTTGAAGGTGAAGTTTTAGCCTTGGTTGGTGAGTCTGGTTCAGGAAAATCAGTCT
TGACTAAAACTTTTACAGGGATGCTGGAAGAAAATGGTCGTGTAGCTAGCGGATCTATCGACTACCGTGGCAAAGACTTG
ACTAAATTTAAGAGTCACCAAGATTGGGCAGCTATCCGTGGAGCTAAGATTGCAACTATTTTCCAAGATCCAATGACCAG
TCTTAACCCAATTAAGACTATCGGAAGTCAAATTATTGAAGTTATTGTTAAGCACCAAGGGAAAACAGCCAAGGAAGCTA
AAAAAATGGCAATTGATTACATGGACAAGGTTGGTATTCCAGATGCTGAAAAACGTTTCAATGAATATCCTTTCCAATAC
TCTGGTGGGATGCGTCAACGTATCGTTATTGCCATTGCCTTGGCTTGTCGTCCTGATGTCCTTATCTGTGACGAACCAAC
AACTGCCCTTGATGTGACCATTCAAGCTCAAATCATTGACCTCTTGAAATCACTCAAAGAGGAGTATGGTTTCTCGGTCA
TTTTCATTACCCATGACCTTGGCGTCGTAGCAAGTATCGCGGACAAGGTTGCTGTCATGTATGCTGGCGAAATCATTGAA
TACGCAACTGTTGAGGAAATTTTCTATGAGCCTTGTCATCCATACACGTGGAGCTTGCTTTCAAGTCTGCCACAATTGGC
TGATGATAATGGAAAACTCTTCTCAATTCCAGGGACGCCACCATCACTTTATACACCAGTTGTTGGGGATGCCTTTGCCT
TGCGTTCAGATTATGCTTTGCAGATTGATTTTGAGGAAAAAGCACCACAATTCCAAGTTTCAGATACTCACTGGGCTAAG
ACCTGGCTCTTACATGAGGATGCGCCAAAAGTTGATAAACCTGCGGTTATCCAAAATCTACATGAAAAAATCCTAGCCAA
TATGGGATTTGCACATTTAGGAGATGAGGAGGAAGGCAATGCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus thermophilus LMG 18311

100

100

1

  amiE Streptococcus thermophilus LMD-9

100

100

1

  amiE Streptococcus salivarius strain HSISS4

96.953

100

0.97

  oppD Streptococcus mutans UA159

54.441

96.676

0.526


Multiple sequence alignment