Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Machinery gene
Locus tag   NMA_RS05545 Genome accession   NC_003116
Coordinates   1055468..1056082 (+) Length   204 a.a.
NCBI ID   WP_010981160.1    Uniprot ID   A0A0U1RIG9
Organism   Neisseria meningitidis Z2491     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1050468..1061082
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMA_RS05525 (NMA1102) - 1050549..1051058 (+) 510 WP_002213852.1 isoprenylcysteine carboxyl methyltransferase family protein -
  NMA_RS05530 (NMA1104) - 1052308..1052895 (-) 588 WP_002246908.1 superoxide dismutase -
  NMA_RS05535 (NMA1105) dnaB 1053058..1054464 (+) 1407 WP_002238995.1 replicative DNA helicase -
  NMA_RS05540 (NMA1106) pilH 1054773..1055438 (+) 666 WP_010981159.1 GspH/FimT family pseudopilin Machinery gene
  NMA_RS05545 (NMA1107) pilV 1055468..1056082 (+) 615 WP_010981160.1 type IV pilus modification protein PilV Machinery gene
  NMA_RS05550 (NMA1108) pilJ 1056079..1057077 (+) 999 WP_010981161.1 PilW family protein Machinery gene
  NMA_RS05555 (NMA1109) pilK 1057056..1057649 (+) 594 WP_010981162.1 pilus assembly PilX family protein Machinery gene
  NMA_RS05560 (NMA1110) pilX 1057654..1058127 (+) 474 WP_002245541.1 PilX family type IV pilin Machinery gene
  NMA_RS05565 (NMA1111) - 1059491..1059919 (-) 429 Protein_1052 AzlC family ABC transporter permease -
  NMA_RS05570 (NMA1112) dut 1060062..1060514 (+) 453 WP_002226436.1 dUTP diphosphatase -

Sequence

Protein


Download         Length: 204 a.a.        Molecular weight: 22062.99 Da        Isoelectric Point: 5.2285

>NTDB_id=21646 NMA_RS05545 WP_010981160.1 1055468..1056082(+) (pilV) [Neisseria meningitidis Z2491]
MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYMGNHHALSVVDGDFQVDAIKTKTQLAEAQLKRFSYELKNALPDAAAIHYAVCKDSSGVAPTLSAGSTFSSNCDGSA
NGDTLIKVLWVNDSAGDSDIARTNLETNGNNIVYTYQARVGGRE

Nucleotide


Download         Length: 615 bp        

>NTDB_id=21646 NMA_RS05545 WP_010981160.1 1055468..1056082(+) (pilV) [Neisseria meningitidis Z2491]
ATGAAGAATAATGATTGCTTCCGCCTGAAAAACCCCCAGTCCGGTATGGCGCTGATAGAAGTCTTGGTCGCTATGCTCGT
TCTGACCATCGGTATTTTGGCACTATTGTCTGTTCAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCAGAGACGCAAACCA
TCGTCAGTCAAATCACGCAAAACCTGATGGAAGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACATGGGAAACCATCATGCACTATCAGTTGTGGATGGCGATTTTCAGGTTGATGCCATAAAAACTAAGAC
GCAGTTGGCAGAGGCACAATTGAAGAGATTTAGTTATGAGCTGAAAAATGCCTTGCCGGATGCGGCAGCCATCCATTACG
CCGTCTGCAAGGATTCGTCGGGTGTTGCGCCGACATTGTCCGCCGGCAGTACTTTTTCTTCAAATTGCGATGGTAGTGCA
AATGGGGATACTTTGATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATCGCCCGTACGAATCTTGAGAC
GAACGGCAACAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGGGAATGA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0U1RIG9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

90.821

100

0.922
  pilI Neisseria gonorrhoeae MS11

83.824

100

0.838
  pilV Neisseria gonorrhoeae MS11

83.824

100

0.838

Multiple sequence alignment