Detailed information    

insolico Bioinformatically predicted

Overview


Name   comE/blpR   Type   Regulator
Locus tag   BWR56_RS07915 Genome accession   NZ_CP019562
Coordinates   1612961..1613698 (-) Length   245 a.a.
NCBI ID   WP_049505121.1    Uniprot ID   -
Organism   Streptococcus oralis strain S.MIT/ORALIS-351     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 1607961..1618698
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWR56_RS07880 (BWR56_1563) blpZ 1608275..1608523 (-) 249 WP_049505111.1 immunity protein BlpZ -
  BWR56_RS07885 (BWR56_1564) - 1608565..1609254 (-) 690 WP_049505112.1 CPBP family intramembrane glutamic endopeptidase -
  BWR56_RS07890 (BWR56_1565) - 1609306..1609689 (-) 384 WP_049505114.1 hypothetical protein -
  BWR56_RS07895 (BWR56_1566) - 1609761..1610165 (-) 405 WP_049505115.1 hypothetical protein -
  BWR56_RS07900 (BWR56_1567) - 1610226..1610894 (-) 669 WP_049505117.1 CPBP family intramembrane glutamic endopeptidase -
  BWR56_RS07905 - 1611173..1611529 (-) 357 WP_049505118.1 hypothetical protein -
  BWR56_RS07910 (BWR56_1568) - 1611598..1612947 (-) 1350 WP_049505119.1 sensor histidine kinase -
  BWR56_RS07915 (BWR56_1569) comE/blpR 1612961..1613698 (-) 738 WP_049505121.1 response regulator transcription factor Regulator
  BWR56_RS07920 (BWR56_1570) - 1613703..1614041 (-) 339 WP_049505123.1 LytTR family DNA-binding domain-containing protein -
  BWR56_RS07925 (BWR56_1571) - 1614320..1614649 (+) 330 WP_049505124.1 hypothetical protein -
  BWR56_RS07930 (BWR56_1572) - 1614798..1615847 (-) 1050 WP_049505126.1 ABC transporter permease -
  BWR56_RS07935 (BWR56_1573) pptA 1615844..1616575 (-) 732 WP_049505127.1 ABC transporter ATP-binding protein Regulator
  BWR56_RS07940 (BWR56_1574) - 1616643..1617053 (+) 411 WP_001278305.1 HIT family protein -
  BWR56_RS07945 (BWR56_1575) - 1617063..1617350 (+) 288 WP_049505129.1 hypothetical protein -

Sequence


Protein


Download         Length: 245 a.a.        Molecular weight: 28743.95 Da        Isoelectric Point: 6.5015

>NTDB_id=216334 BWR56_RS07915 WP_049505121.1 1612961..1613698(-) (comE/blpR) [Streptococcus oralis strain S.MIT/ORALIS-351]
MRIFVLEDDFSQQARIETTIEKLLKKQSIIPSSFEVFGKPDQLLAEVHEKGAHQLFFLDIEIRNEEMKGLEVARKIRDRD
PYALIVFVTTHSEFMPLSFRYQVSALDYIDKALSAEEFESRIETALLYANSQDSKSLAEDCFYFKSKFAQFQYPFKEVYY
LETSPRAHRVILYTKTDRLEFTASLEEVFKQEPRLLQCHRSFLINPANVVRLDKKEKLLYFPNGGSCLIARYKVREVSEA
INNLH

Nucleotide


Download         Length: 738 bp        

>NTDB_id=216334 BWR56_RS07915 WP_049505121.1 1612961..1613698(-) (comE/blpR) [Streptococcus oralis strain S.MIT/ORALIS-351]
ATGAGAATATTTGTTTTAGAAGATGACTTTTCCCAACAAGCTAGAATTGAAACGACGATTGAGAAACTTTTGAAAAAACA
GAGTATCATTCCTAGTTCTTTTGAAGTCTTTGGGAAACCAGACCAACTGCTGGCAGAGGTGCATGAGAAGGGAGCCCATC
AGCTATTCTTTTTGGATATTGAGATTCGAAATGAGGAGATGAAAGGTCTAGAGGTAGCTAGAAAGATTCGAGATCGGGAT
CCTTATGCCCTCATCGTCTTTGTGACGACTCACTCGGAGTTTATGCCCCTGTCCTTTCGCTACCAGGTGTCTGCTTTGGA
CTACATTGATAAGGCCTTGTCAGCAGAGGAATTTGAGTCTCGTATCGAGACAGCCCTCCTCTATGCCAATAGTCAAGACA
GTAAGAGTCTGGCGGAAGATTGCTTTTACTTTAAATCAAAATTTGCTCAATTCCAGTATCCTTTTAAAGAGGTTTACTAT
CTCGAAACGTCGCCCAGAGCCCATCGTGTTATTCTCTATACCAAGACGGACAGGCTGGAATTTACAGCGAGTTTAGAGGA
GGTTTTCAAGCAGGAGCCCCGTCTCTTGCAGTGCCACCGCTCTTTTCTCATCAATCCTGCCAATGTAGTTCGTTTGGATA
AGAAAGAAAAACTGCTTTACTTTCCCAATGGTGGAAGTTGCCTGATCGCGCGTTATAAGGTCAGGGAAGTGTCTGAGGCC
ATCAATAACTTACACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

55.144

99.184

0.547

  comE/comE1 Streptococcus equinus JB1

43.46

96.735

0.42

  comE/comE2 Streptococcus equinus JB1

39.256

98.776

0.388


Multiple sequence alignment