Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   BWR56_RS07935 Genome accession   NZ_CP019562
Coordinates   1615844..1616575 (-) Length   243 a.a.
NCBI ID   WP_049505127.1    Uniprot ID   -
Organism   Streptococcus oralis strain S.MIT/ORALIS-351     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1610844..1621575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWR56_RS07905 - 1611173..1611529 (-) 357 WP_049505118.1 hypothetical protein -
  BWR56_RS07910 (BWR56_1568) - 1611598..1612947 (-) 1350 WP_049505119.1 sensor histidine kinase -
  BWR56_RS07915 (BWR56_1569) comE/blpR 1612961..1613698 (-) 738 WP_049505121.1 response regulator transcription factor Regulator
  BWR56_RS07920 (BWR56_1570) - 1613703..1614041 (-) 339 WP_049505123.1 LytTR family DNA-binding domain-containing protein -
  BWR56_RS07925 (BWR56_1571) - 1614320..1614649 (+) 330 WP_049505124.1 hypothetical protein -
  BWR56_RS07930 (BWR56_1572) - 1614798..1615847 (-) 1050 WP_049505126.1 ABC transporter permease -
  BWR56_RS07935 (BWR56_1573) pptA 1615844..1616575 (-) 732 WP_049505127.1 ABC transporter ATP-binding protein Regulator
  BWR56_RS07940 (BWR56_1574) - 1616643..1617053 (+) 411 WP_001278305.1 HIT family protein -
  BWR56_RS07945 (BWR56_1575) - 1617063..1617350 (+) 288 WP_049505129.1 hypothetical protein -
  BWR56_RS07955 (BWR56_1576) dnaJ 1617792..1618928 (-) 1137 WP_049505132.1 molecular chaperone DnaJ -
  BWR56_RS07960 (BWR56_1577) dnaK 1619329..1621152 (-) 1824 WP_049505133.1 molecular chaperone DnaK -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27197.67 Da        Isoelectric Point: 4.7159

>NTDB_id=216335 BWR56_RS07935 WP_049505127.1 1615844..1616575(-) (pptA) [Streptococcus oralis strain S.MIT/ORALIS-351]
MLEIKNLTGGYVHVPVLKDVSFIVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGEIKINGLTLREDATSYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFDRAEPLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAISDLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAQGNLQQLREAFDMPEASLNDIYLALTKE
EEL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=216335 BWR56_RS07935 WP_049505127.1 1615844..1616575(-) (pptA) [Streptococcus oralis strain S.MIT/ORALIS-351]
ATGTTAGAAATTAAAAACCTGACAGGAGGCTATGTCCACGTTCCTGTCTTGAAAGATGTGTCCTTTATCGTTGAAAGTGG
GCAATTGGTCGGTTTGATTGGTCTCAACGGTGCTGGAAAATCAACGACTATCAATGAGATTATCGGTCTTTTGACGCCTT
ACAGTGGGGAAATTAAGATTAATGGTTTAACCCTGCGAGAAGATGCGACTAGCTACCGCAAGCAGATTGGCTATATTCCT
GAAACGCCTAGCTTGTATGAGGAATTGACCCTCAGAGAGCATATCGAGACGGTTGCCATGGCTTATGGTATTGAGCAAAA
AGTGGCTTTTGATCGTGCGGAACCTTTGTTAAAAATGTTCCGTTTGGACCAAAAATTAGACTGGTTCCCAGTGCATTTTT
CCAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTTGTCGTGGATCCGAGTCTTTTCATCGTTGATGAGCCTTTC
CTTGGCCTCGATCCGCTGGCTATTTCTGACTTGATTCAGCTTTTGGAAGTAGAAAAGCAAAAAGGCAAGTCCATCCTCAT
GAGTACCCACGTGCTGGATTCGGCGGAAAAGATGTGTGACGCCTTTGTTATCCTCCACAAGGGAGAGGTGCGGGCTCAGG
GGAACCTCCAGCAACTCCGCGAAGCCTTTGACATGCCCGAGGCTAGCTTGAACGACATTTACTTGGCTCTAACCAAAGAG
GAGGAGCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

73.444

99.177

0.728
  pptA Streptococcus thermophilus LMD-9

72.614

99.177

0.72

Multiple sequence alignment