Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | BWR18_RS06125 | Genome accession | NZ_CP019312 |
| Coordinates | 1231160..1231657 (-) | Length | 165 a.a. |
| NCBI ID | WP_076627159.1 | Uniprot ID | A0A1P8MT83 |
| Organism | Tateyamaria omphalii strain DOK1-4 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1226160..1236657
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BWR18_RS06100 (BWR18_06070) | - | 1227026..1228564 (-) | 1539 | WP_076627154.1 | hypothetical protein | - |
| BWR18_RS21875 (BWR18_06075) | - | 1228554..1228703 (-) | 150 | WP_172839363.1 | hypothetical protein | - |
| BWR18_RS06110 (BWR18_06080) | - | 1228797..1229384 (+) | 588 | WP_076627156.1 | shikimate kinase | - |
| BWR18_RS06115 (BWR18_06085) | aroB | 1229377..1230489 (+) | 1113 | WP_076627157.1 | 3-dehydroquinate synthase | - |
| BWR18_RS06120 (BWR18_06090) | - | 1230513..1231109 (+) | 597 | WP_076627158.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| BWR18_RS06125 (BWR18_06095) | ssb | 1231160..1231657 (-) | 498 | WP_076627159.1 | single-stranded DNA-binding protein | Machinery gene |
| BWR18_RS06130 (BWR18_06100) | - | 1231832..1232419 (+) | 588 | WP_076627160.1 | lytic transglycosylase domain-containing protein | - |
| BWR18_RS06135 (BWR18_06105) | - | 1232481..1232993 (+) | 513 | WP_172839364.1 | hypothetical protein | - |
| BWR18_RS06140 (BWR18_06110) | - | 1232994..1235081 (-) | 2088 | WP_076627162.1 | ABC transporter ATP-binding protein | - |
| BWR18_RS06145 (BWR18_06115) | - | 1235177..1236628 (-) | 1452 | WP_076627163.1 | ABC transporter permease | - |
Sequence
Protein
Download Length: 165 a.a. Molecular weight: 17850.61 Da Isoelectric Point: 5.3190
>NTDB_id=214805 BWR18_RS06125 WP_076627159.1 1231160..1231657(-) (ssb) [Tateyamaria omphalii strain DOK1-4]
MAGSVNKVILIGNLGRDPEVRTFQNGGKVCNLRIATSETWKDRNTGERKERTEWHSVAIFSEPLARVAEQYLRKGSKVYL
EGQLETRKWQDQSGQDRYSTEVVLRPYTSTLTMLDGRGEGGGGGNFGGGGGGGQMGYDDQSGGYGGGSSQPSPAPSRDLD
DEIPF
MAGSVNKVILIGNLGRDPEVRTFQNGGKVCNLRIATSETWKDRNTGERKERTEWHSVAIFSEPLARVAEQYLRKGSKVYL
EGQLETRKWQDQSGQDRYSTEVVLRPYTSTLTMLDGRGEGGGGGNFGGGGGGGQMGYDDQSGGYGGGSSQPSPAPSRDLD
DEIPF
Nucleotide
Download Length: 498 bp
>NTDB_id=214805 BWR18_RS06125 WP_076627159.1 1231160..1231657(-) (ssb) [Tateyamaria omphalii strain DOK1-4]
ATGGCAGGGTCCGTCAACAAGGTCATTCTGATCGGCAATCTGGGGCGCGACCCCGAAGTGCGGACGTTCCAGAACGGCGG
CAAGGTATGCAACCTGCGTATCGCGACGTCTGAAACATGGAAAGACCGTAACACGGGCGAGCGCAAGGAACGCACCGAAT
GGCACTCGGTCGCGATCTTTTCGGAACCGCTGGCGCGCGTGGCGGAACAGTATTTGCGCAAGGGGTCCAAGGTGTACCTG
GAAGGTCAGCTTGAGACCCGTAAATGGCAGGATCAGTCCGGCCAAGACCGCTATTCGACCGAGGTTGTGCTGCGCCCCTA
CACCTCGACCCTGACGATGCTGGATGGCCGCGGCGAAGGCGGCGGTGGCGGCAACTTTGGCGGCGGCGGTGGCGGTGGCC
AGATGGGGTATGATGACCAGAGCGGCGGCTATGGTGGCGGAAGCAGCCAGCCAAGCCCGGCGCCCAGCCGCGATCTGGAC
GACGAAATTCCGTTCTAG
ATGGCAGGGTCCGTCAACAAGGTCATTCTGATCGGCAATCTGGGGCGCGACCCCGAAGTGCGGACGTTCCAGAACGGCGG
CAAGGTATGCAACCTGCGTATCGCGACGTCTGAAACATGGAAAGACCGTAACACGGGCGAGCGCAAGGAACGCACCGAAT
GGCACTCGGTCGCGATCTTTTCGGAACCGCTGGCGCGCGTGGCGGAACAGTATTTGCGCAAGGGGTCCAAGGTGTACCTG
GAAGGTCAGCTTGAGACCCGTAAATGGCAGGATCAGTCCGGCCAAGACCGCTATTCGACCGAGGTTGTGCTGCGCCCCTA
CACCTCGACCCTGACGATGCTGGATGGCCGCGGCGAAGGCGGCGGTGGCGGCAACTTTGGCGGCGGCGGTGGCGGTGGCC
AGATGGGGTATGATGACCAGAGCGGCGGCTATGGTGGCGGAAGCAGCCAGCCAAGCCCGGCGCCCAGCCGCGATCTGGAC
GACGAAATTCCGTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
49.735 |
100 |
0.57 |
| ssb | Vibrio cholerae strain A1552 |
53.757 |
100 |
0.564 |
| ssb | Neisseria meningitidis MC58 |
44.693 |
100 |
0.485 |
| ssb | Neisseria gonorrhoeae MS11 |
44.134 |
100 |
0.479 |