Detailed information
Bioinformatically predicted
Overview
| Name | comW | Type | Regulator |
| Locus tag | BWQ98_RS00115 | Genome accession | NZ_CP019299 |
| Coordinates | 21480..21716 (+) | Length | 78 a.a. |
| NCBI ID | WP_000939548.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain HKU1-14 | ||
| Function | stabilization and activation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 16480..26716
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BWQ98_RS00105 (BWQ98_00105) | - | 20262..20471 (+) | 210 | Protein_14 | transposase | - |
| BWQ98_RS00110 (BWQ98_00110) | - | 20506..21220 (-) | 715 | Protein_15 | transposase | - |
| BWQ98_RS00115 (BWQ98_00115) | comW | 21480..21716 (+) | 237 | WP_000939548.1 | sigma(X)-activator ComW | Regulator |
| BWQ98_RS00120 (BWQ98_00120) | - | 21947..23233 (+) | 1287 | WP_000205044.1 | adenylosuccinate synthase | - |
| BWQ98_RS00125 (BWQ98_00125) | tadA | 23434..23901 (+) | 468 | WP_000291875.1 | tRNA adenosine(34) deaminase TadA | - |
| BWQ98_RS00135 (BWQ98_00135) | - | 24088..24531 (+) | 444 | WP_000701992.1 | dUTP diphosphatase | - |
| BWQ98_RS00140 (BWQ98_00140) | - | 24533..25048 (+) | 516 | WP_000691236.1 | histidine phosphatase family protein | - |
| BWQ98_RS00145 (BWQ98_00145) | radA | 25062..26423 (+) | 1362 | WP_074017595.1 | DNA repair protein RadA | Machinery gene |
Sequence
Protein
Download Length: 78 a.a. Molecular weight: 9716.17 Da Isoelectric Point: 6.7051
>NTDB_id=214668 BWQ98_RS00115 WP_000939548.1 21480..21716(+) (comW) [Streptococcus pneumoniae strain HKU1-14]
MLQKIYEQMTNFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRRDFIVYHYRVAYRLYLEKLVMNRGFISC
MLQKIYEQMTNFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRRDFIVYHYRVAYRLYLEKLVMNRGFISC
Nucleotide
Download Length: 237 bp
>NTDB_id=214668 BWQ98_RS00115 WP_000939548.1 21480..21716(+) (comW) [Streptococcus pneumoniae strain HKU1-14]
ATGTTACAAAAAATTTATGAGCAGATGACTAATTTCTATGATAGTATTGAAGAAGAGTATGGTCCTACATTTGGTGATAA
TTTTGACTGGGAACATGTTCATTTTAAATTTTTAATTTATTATTTAGTGAGATATGGCATTGGTTGTCGTAGGGATTTTA
TCGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGGTAATGAATCGGGGTTTTATTTCTTGTTGA
ATGTTACAAAAAATTTATGAGCAGATGACTAATTTCTATGATAGTATTGAAGAAGAGTATGGTCCTACATTTGGTGATAA
TTTTGACTGGGAACATGTTCATTTTAAATTTTTAATTTATTATTTAGTGAGATATGGCATTGGTTGTCGTAGGGATTTTA
TCGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGGTAATGAATCGGGGTTTTATTTCTTGTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comW | Streptococcus pneumoniae Rx1 |
97.436 |
100 |
0.974 |
| comW | Streptococcus pneumoniae D39 |
97.436 |
100 |
0.974 |
| comW | Streptococcus pneumoniae R6 |
97.436 |
100 |
0.974 |
| comW | Streptococcus pneumoniae TIGR4 |
97.436 |
100 |
0.974 |
| comW | Streptococcus mitis SK321 |
76.923 |
100 |
0.769 |
| comW | Streptococcus mitis NCTC 12261 |
76.623 |
98.718 |
0.756 |