Detailed information NTG0212936

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: CS058_RS09665
• Genome accession: NZ_CP024477
• Coordinates: 1999053..2001065 (+)
• Length: 670 a.a.
• NCBI ID: WP_003104590.1
• Uniprot ID: P72174
• Organism: Pseudomonas aeruginosa strain 12939
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1994053..2006065

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CS058_RS09645	-	1994935..1996932 (+)	1998	WP_023088173.1	polysaccharide biosynthesis protein	-
CS058_RS09650	comEA/comE1	1997123..1997452 (+)	330	WP_023084085.1	ComEA family DNA-binding protein	Machinery gene
CS058_RS09660	-	1997669..1998865 (-)	1197	WP_003104588.1	amino acid aminotransferase	-
CS058_RS09665	uvrB	1999053..2001065 (+)	2013	WP_003104590.1	excinuclease ABC subunit UvrB	Machinery gene
CS058_RS09670	-	2001069..2002568 (-)	1500	WP_079383894.1	MDR family MFS transporter	-
CS058_RS09675	-	2002618..2003652 (-)	1035	WP_034024758.1	HlyD family secretion protein	-
CS058_RS09680	-	2003755..2004675 (+)	921	WP_003091419.1	LysR family transcriptional regulator	-

Sequence

Protein

• Length: 670 a.a.
• Molecular weight: 76067.31 Da
• Isoelectric Point: 5.0950

>NTDB_id=212936 CS058_RS09665 WP_003104590.1 1999053..2001065(+) (uvrB) [Pseudomonas aeruginosa strain 12939]
MDTFQLDSRFKPAGDQPEAIRQMVEGLEAGLSHQTLLGVTGSGKTFSIANVIAQVQRPTLVLAPNKTLAAQLYGEFKTFF
PHNSVEYFVSYYDYYQPEAYVPSSDTYIEKDSSINDHIEQMRLSATKALLERPDAIIVATVSSIYGLGDPASYLKMVLHL
DRGDRIDQRELLRRLTSLQYTRNDMDFARATFRVRGDVIDIFPAESDLEAIRVELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLEAVDQIKAELKERLDYLRNNNKLVEAQRLEQRTRFDLEMILELGYCNGIENYSRYLSGRAPGEP
PPTLYDYLPANSLLVIDESHVSVPQVGAMFKGDRSRKETLVEYGFRLPSALDNRPLRFEEWEAVSPQTIFVSATPGPYEA
EHAGRVIEQVVRPTGLVDPEIEVRPAMTQVDDLLSQIRQRVAKDERVLVTTLTKRMAEDLTDYLGDHDVRVRYLHSDIDT
VERVEIIRDLRAGAFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLHGKAILYADNVTGSMQ
RAIDETERRRAKQIAFNEAHGIVPKGVRKDIKDILEGAVVPGARGKRKGVAKVAEESGRYENELRSPSEISKRIRQLEEK
MYQLARDLEFEAAAQLRDEIQTLRERLVNV

Nucleotide

• Length: 2013 bp

>NTDB_id=212936 CS058_RS09665 WP_003104590.1 1999053..2001065(+) (uvrB) [Pseudomonas aeruginosa strain 12939]
ATGGATACGTTCCAACTCGACTCGCGCTTCAAGCCCGCCGGCGACCAACCGGAAGCCATCCGGCAGATGGTCGAGGGGCT
GGAGGCGGGGCTTTCGCACCAGACCCTGCTGGGGGTGACGGGCTCTGGCAAGACTTTCAGCATTGCCAACGTGATTGCCC
AGGTGCAGCGCCCGACCCTGGTCCTGGCGCCGAACAAGACCCTGGCGGCCCAGCTCTATGGGGAGTTCAAGACGTTCTTC
CCGCACAATTCCGTGGAGTACTTCGTTTCCTACTACGACTACTACCAGCCGGAGGCCTACGTACCGTCTTCCGATACCTA
TATCGAGAAGGACTCCTCGATCAACGACCATATCGAGCAGATGCGCCTGTCGGCGACCAAGGCGCTGCTCGAGCGTCCGG
ATGCGATCATCGTCGCCACCGTGTCGTCCATCTACGGCCTCGGTGATCCCGCGTCCTACCTGAAGATGGTCCTGCACCTG
GACCGCGGCGACCGCATCGACCAGCGCGAACTGCTGCGACGACTGACCAGCCTGCAGTACACCCGCAACGACATGGATTT
CGCCCGTGCGACTTTCCGTGTGCGTGGCGATGTGATCGACATCTTCCCGGCCGAATCCGATCTCGAGGCGATTCGTGTCG
AGTTGTTCGACGACGAGGTGGAAAGCCTCTCGGCCTTCGATCCGCTCACCGGCGAGGTGATCCGCAAGCTGCCGCGCTTC
ACCTTCTATCCCAAGAGCCACTACGTGACCCCGCGCGAGACGCTGCTGGAGGCGGTCGACCAGATCAAGGCCGAACTCAA
GGAACGCCTGGACTACCTGCGCAACAACAACAAGCTGGTGGAAGCCCAGCGCCTGGAGCAGCGCACGCGTTTCGACCTGG
AGATGATCCTCGAACTGGGCTACTGCAACGGCATCGAGAACTACTCGCGCTATCTTTCCGGGCGGGCCCCCGGCGAGCCA
CCGCCGACGCTCTACGACTACCTGCCGGCCAACTCGCTGCTGGTTATCGACGAATCGCACGTCAGCGTTCCGCAGGTCGG
CGCGATGTTCAAGGGCGACCGCTCGCGCAAGGAGACCCTGGTGGAATACGGTTTCCGCCTGCCTTCGGCGCTGGACAACC
GGCCGCTGCGCTTCGAAGAGTGGGAGGCGGTGAGTCCGCAGACCATCTTCGTCTCCGCCACCCCGGGCCCCTACGAGGCG
GAACATGCCGGGCGGGTCATCGAGCAGGTGGTGCGTCCCACCGGGCTGGTCGATCCGGAGATCGAGGTACGCCCGGCGAT
GACCCAGGTGGATGACCTGCTCTCGCAGATCCGCCAGCGGGTGGCCAAGGACGAGCGGGTGCTGGTGACTACCCTGACCA
AGCGCATGGCCGAGGACCTCACCGATTATCTCGGCGATCACGACGTGCGGGTGCGCTACCTGCACTCGGACATCGATACC
GTCGAGCGAGTGGAGATCATCCGCGACCTGCGCGCCGGTGCGTTCGACGTGCTGGTGGGGATCAACCTGCTGCGCGAAGG
CCTGGACATGCCCGAGGTGTCGCTGGTGGCGATCCTCGACGCGGACAAGGAAGGCTTCCTGCGCTCGGAGCGCTCGCTGA
TCCAGACCATCGGTCGTGCCGCGCGCAACCTGCACGGCAAGGCGATCCTCTACGCCGACAACGTCACCGGCTCGATGCAG
CGTGCGATCGACGAGACCGAGCGGCGTCGGGCCAAGCAGATCGCCTTCAACGAAGCCCATGGCATCGTGCCCAAGGGGGT
GCGCAAGGACATCAAGGACATTCTCGAAGGCGCCGTGGTGCCCGGCGCGCGCGGCAAGCGCAAGGGCGTGGCCAAGGTGG
CGGAGGAGAGCGGGCGCTACGAGAACGAACTGCGCTCGCCGAGCGAGATCAGCAAGCGCATCCGCCAACTGGAGGAAAAG
ATGTACCAGTTGGCCCGCGACCTGGAGTTCGAGGCGGCGGCGCAACTGCGCGACGAGATCCAGACGCTGCGCGAGCGCCT
GGTCAACGTCTGA

Domains

Predicted by InterProScan.

• UvrB/uvrC motif (UVR) (632-665)

• UvrB interaction domain (UvrB_inter) (158-248)

• Ultra-violet resistance protein B (UvrB) (550-592)

• Helicase conserved C-terminal domain (Helicase_C) (435-542)

• Type III restriction enzyme, res subunit (ResIII) (11-118)

3D structure

• AlphaFold DB: P72174

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae TIGR4	57.839	98.06	0.567
uvrB	Streptococcus pneumoniae R6	57.839	98.06	0.567
uvrB	Streptococcus pneumoniae D39	57.839	98.06	0.567