Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   NP7_RS00090 Genome accession   NZ_CP024443
Coordinates   21156..22385 (+) Length   409 a.a.
NCBI ID   WP_100269218.1    Uniprot ID   -
Organism   Moraxella osloensis strain NP7     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 16156..27385
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP7_RS00065 (NP7_00065) - 16757..17503 (-) 747 WP_100269215.1 glutathione peroxidase -
  NP7_RS00070 (NP7_00070) - 17784..18272 (+) 489 WP_036591734.1 YajQ family cyclic di-GMP-binding protein -
  NP7_RS00075 (NP7_00075) hisB 18352..18954 (-) 603 WP_062333013.1 imidazoleglycerol-phosphate dehydratase HisB -
  NP7_RS00080 (NP7_00080) def 18977..19507 (-) 531 WP_100269216.1 peptide deformylase -
  NP7_RS00085 (NP7_00085) tsaP 19883..20986 (+) 1104 WP_100269217.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  NP7_RS00090 (NP7_00090) dprA 21156..22385 (+) 1230 WP_100269218.1 DNA-processing protein DprA Machinery gene
  NP7_RS00095 (NP7_00095) - 22435..23040 (+) 606 WP_100269219.1 L-threonylcarbamoyladenylate synthase -
  NP7_RS00100 (NP7_00100) grpE 23253..23852 (+) 600 WP_062332997.1 nucleotide exchange factor GrpE -
  NP7_RS00105 (NP7_00105) dnaK 23996..25918 (+) 1923 WP_100269220.1 molecular chaperone DnaK -

Sequence


Protein


Download         Length: 409 a.a.        Molecular weight: 44621.08 Da        Isoelectric Point: 6.7814

>NTDB_id=212860 NP7_RS00090 WP_100269218.1 21156..22385(+) (dprA) [Moraxella osloensis strain NP7]
MQDYQPNLNPAQQAALLLWHLVNLSVPVYNKLVARFGSAEQAIQAKLADWQALGLHDNHHKRFAEFISASRTSQFLHDTL
LELSQGQYGVVFHNDPLYPTQLKNIYDPPPLLFYQGNLSALSQPQLAIVGSRKPSPHAEKIAFDMAQYLAHEGLWVTSGM
AEGIDKQAHLGALSLQMTGTQGGTIAVLGNGIKHCYPKNHASLKAHIIASGGCVISELLPDMPSNRYHFPRRNRLVAGLS
LATLVVEAAAKSGSLITAREANEQGKQVFAIPSHIDNLNAKGCHQLIREGATLVDHPSQILEDLSIFKSPLVKATEVEPA
PIVAQAVSNNPQLPSESASNTQPHQAPLAMEVAPHLQTLLNQLDWVGQDLDSLVDKTGTDIATLMGWLIELELMGLVMQR
GGLYMRCRP

Nucleotide


Download         Length: 1230 bp        

>NTDB_id=212860 NP7_RS00090 WP_100269218.1 21156..22385(+) (dprA) [Moraxella osloensis strain NP7]
ATGCAGGATTATCAGCCTAACCTAAACCCGGCGCAGCAGGCTGCCTTATTGTTATGGCATTTAGTGAACTTATCGGTGCC
TGTTTATAACAAGCTTGTAGCGCGTTTTGGTAGCGCTGAACAAGCGATTCAAGCCAAGCTGGCAGACTGGCAAGCACTGG
GCTTGCATGATAATCATCACAAACGCTTTGCTGAGTTTATCAGCGCCAGTCGAACTAGCCAATTTTTGCATGATACGCTA
TTAGAGCTATCACAAGGGCAGTATGGGGTTGTGTTTCATAATGACCCTCTATATCCCACGCAGTTAAAAAACATCTATGA
CCCACCGCCTTTGTTATTTTATCAAGGCAACTTATCTGCACTAAGCCAACCACAATTGGCGATCGTTGGGAGTCGTAAAC
CTAGCCCACATGCTGAAAAAATCGCCTTTGATATGGCGCAATATTTGGCGCACGAAGGCTTATGGGTCACCAGTGGCATG
GCAGAAGGCATTGACAAACAAGCGCATTTAGGTGCGTTAAGTCTACAAATGACTGGCACACAAGGTGGTACTATTGCGGT
ACTGGGCAATGGTATTAAACATTGTTACCCAAAAAATCACGCCAGCCTTAAAGCCCATATTATTGCGTCAGGTGGCTGCG
TCATTAGTGAATTATTGCCTGATATGCCGAGCAATCGTTACCATTTTCCAAGGCGCAATCGGCTCGTCGCTGGGCTAAGT
TTGGCAACTTTGGTTGTAGAAGCCGCTGCCAAAAGCGGCTCGCTCATCACTGCCAGAGAAGCCAATGAACAAGGCAAACA
AGTCTTTGCTATTCCTAGTCATATTGACAACCTCAACGCCAAAGGTTGCCACCAATTGATTCGTGAAGGTGCGACCTTGG
TCGATCATCCCTCACAAATTTTGGAAGATTTATCAATTTTTAAATCACCGCTTGTCAAAGCCACTGAGGTTGAACCAGCG
CCAATAGTCGCACAGGCAGTGAGCAATAACCCTCAATTACCGTCCGAATCAGCATCAAACACCCAGCCGCACCAAGCGCC
ATTGGCGATGGAGGTGGCGCCGCATTTGCAGACACTACTTAATCAACTTGATTGGGTCGGGCAAGATTTAGACAGCTTGG
TCGATAAGACCGGCACGGATATTGCGACACTTATGGGCTGGCTGATTGAGCTTGAACTCATGGGACTGGTGATGCAGCGC
GGCGGTCTATACATGCGCTGCCGCCCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

44.527

98.289

0.438

  dprA Acinetobacter baumannii D1279779

44.81

96.577

0.433

  dprA Acinetobacter baylyi ADP1

44.133

95.844

0.423