Detailed information    

insolico Bioinformatically predicted

Overview

Name   tsaP   Type   Machinery gene
Locus tag   NP7_RS00085 Genome accession   NZ_CP024443
Coordinates   19883..20986 (+) Length   367 a.a.
NCBI ID   WP_100269217.1    Uniprot ID   -
Organism   Moraxella osloensis strain NP7     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 14883..25986
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP7_RS00065 (NP7_00065) - 16757..17503 (-) 747 WP_100269215.1 glutathione peroxidase -
  NP7_RS00070 (NP7_00070) - 17784..18272 (+) 489 WP_036591734.1 YajQ family cyclic di-GMP-binding protein -
  NP7_RS00075 (NP7_00075) hisB 18352..18954 (-) 603 WP_062333013.1 imidazoleglycerol-phosphate dehydratase HisB -
  NP7_RS00080 (NP7_00080) def 18977..19507 (-) 531 WP_100269216.1 peptide deformylase -
  NP7_RS00085 (NP7_00085) tsaP 19883..20986 (+) 1104 WP_100269217.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  NP7_RS00090 (NP7_00090) dprA 21156..22385 (+) 1230 WP_100269218.1 DNA-processing protein DprA Machinery gene
  NP7_RS00095 (NP7_00095) - 22435..23040 (+) 606 WP_100269219.1 L-threonylcarbamoyladenylate synthase -
  NP7_RS00100 (NP7_00100) grpE 23253..23852 (+) 600 WP_062332997.1 nucleotide exchange factor GrpE -
  NP7_RS00105 (NP7_00105) dnaK 23996..25918 (+) 1923 WP_100269220.1 molecular chaperone DnaK -

Sequence

Protein


Download         Length: 367 a.a.        Molecular weight: 39495.46 Da        Isoelectric Point: 9.2155

>NTDB_id=212859 NP7_RS00085 WP_100269217.1 19883..20986(+) (tsaP) [Moraxella osloensis strain NP7]
MTNYNTTTMKKLSFALLATLGMTVTSVAAANNPPPRIKADAPNRYVVKKGDTLWDISGKFLESPWRWKEIWATNKQIRNP
HLIYPKDVIILCVIKGQKLVGVDTGEGCAGVEKAMSAPVTTTTVVSAAGSIAAIPLTAIETWLERNIIVSPDDFKTTPYV
LASKDKNIITGVGNKIYAKGVPLIVGQRYGVYREGEPYVDPTTRKVIGLEVTQVAAGIVTSVASNGVSSIELKKSYGQEV
REGDRVFVEVGQYLPPAFYPKPASVTRGGRVIRILNSISSAGRDGVIAINLGTSQGAEPGDVLTVYQKGALVLDDYSPVK
GGAVRLPSEQIGHVMVFKAFNDISYAYVLDAESPIHEQDFLLPAVGN

Nucleotide


Download         Length: 1104 bp        

>NTDB_id=212859 NP7_RS00085 WP_100269217.1 19883..20986(+) (tsaP) [Moraxella osloensis strain NP7]
ATGACAAACTATAACACCACGACAATGAAAAAATTATCCTTCGCTTTGTTGGCAACCCTAGGTATGACAGTGACTTCAGT
GGCTGCTGCTAACAACCCGCCGCCTCGTATCAAAGCCGATGCGCCCAACCGTTACGTGGTAAAAAAAGGTGATACGCTCT
GGGATATCTCCGGTAAATTCTTAGAAAGTCCGTGGCGCTGGAAAGAAATCTGGGCGACCAATAAGCAGATTCGTAATCCG
CATCTGATTTATCCAAAAGATGTGATTATCTTATGTGTGATTAAAGGGCAAAAATTGGTCGGTGTAGATACGGGTGAAGG
CTGTGCAGGCGTTGAAAAAGCCATGAGCGCGCCAGTCACCACAACCACAGTGGTAAGTGCCGCAGGTAGCATCGCTGCGA
TTCCTTTGACTGCCATTGAAACATGGCTTGAGCGCAATATCATCGTATCGCCTGATGACTTTAAAACTACCCCCTATGTG
CTTGCTTCAAAAGATAAAAACATTATCACAGGTGTCGGCAACAAAATCTATGCCAAAGGCGTGCCACTCATTGTGGGACA
ACGCTATGGCGTGTACCGTGAGGGCGAACCGTATGTTGACCCAACCACCCGTAAAGTTATCGGTCTTGAAGTCACCCAAG
TTGCCGCAGGTATCGTCACTAGCGTAGCATCAAACGGTGTTTCTAGTATCGAGCTTAAAAAATCGTATGGTCAAGAAGTG
CGCGAAGGTGACCGTGTATTTGTCGAAGTCGGTCAGTACTTGCCACCCGCTTTTTATCCAAAACCTGCCAGCGTTACTCG
TGGCGGTCGCGTGATTCGTATTTTAAATTCCATTAGTAGTGCGGGTCGAGATGGGGTGATTGCCATTAATTTGGGTACCA
GCCAAGGCGCTGAGCCAGGCGATGTGTTGACGGTTTATCAAAAAGGCGCTTTAGTCTTGGACGACTATTCACCCGTAAAA
GGTGGGGCAGTACGATTGCCAAGTGAGCAAATCGGTCATGTGATGGTATTTAAAGCATTTAACGATATAAGCTACGCTTA
TGTACTTGATGCAGAATCACCGATTCATGAGCAAGATTTTTTATTGCCTGCGGTCGGCAACTAA

Domains

Predicted by InterProScan.

LysM domain (LysM)

(45-90)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

42.12

100

0.422