Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | BVD86_RS16650 | Genome accession | NZ_CP018909 |
| Coordinates | 3462538..3463020 (+) | Length | 160 a.a. |
| NCBI ID | WP_002116770.1 | Uniprot ID | A0A009RUX0 |
| Organism | Acinetobacter pittii strain XJ88 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3457538..3468020
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BVD86_RS16640 (BVD86_16670) | pilX | 3457852..3458661 (+) | 810 | WP_199997172.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| BVD86_RS16645 (BVD86_16675) | pilY1 | 3458673..3462527 (+) | 3855 | WP_199997171.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| BVD86_RS16650 (BVD86_16680) | pilY2 | 3462538..3463020 (+) | 483 | WP_002116770.1 | type IV pilin protein | Machinery gene |
| BVD86_RS16655 (BVD86_16685) | pilE | 3463017..3463442 (+) | 426 | WP_101664438.1 | type IV pilin protein | Machinery gene |
| BVD86_RS16660 (BVD86_16690) | rpsP | 3463590..3463841 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| BVD86_RS16665 (BVD86_16695) | rimM | 3463861..3464409 (+) | 549 | WP_002116736.1 | ribosome maturation factor RimM | - |
| BVD86_RS16670 (BVD86_16700) | trmD | 3464452..3465207 (+) | 756 | WP_002116964.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| BVD86_RS16675 (BVD86_16705) | rplS | 3465427..3465795 (+) | 369 | WP_002116654.1 | 50S ribosomal protein L19 | - |
| BVD86_RS16680 (BVD86_16710) | lip | 3465847..3466788 (-) | 942 | WP_014207808.1 | lipase family alpha/beta hydrolase | - |
| BVD86_RS16685 (BVD86_16715) | - | 3466904..3467935 (-) | 1032 | WP_101664439.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17520.76 Da Isoelectric Point: 8.4721
>NTDB_id=211779 BVD86_RS16650 WP_002116770.1 3462538..3463020(+) (pilY2) [Acinetobacter pittii strain XJ88]
MNKYYIQRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGAVTCNVCETNSENWQ
MNKYYIQRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGAVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=211779 BVD86_RS16650 WP_002116770.1 3462538..3463020(+) (pilY2) [Acinetobacter pittii strain XJ88]
ATGAATAAATACTATATCCAACGGTTTAATCAGGGTGTTACCTTGATTGAGCTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAGTTGGAACGGCATAAATCCAAGAACTTTACCTATAGAGGATTTACTACGACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAGAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAATTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAGCAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAATACTATATCCAACGGTTTAATCAGGGTGTTACCTTGATTGAGCTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAGTTGGAACGGCATAAATCCAAGAACTTTACCTATAGAGGATTTACTACGACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAGAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAATTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAGCAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
93.75 |
100 |
0.938 |
| comE | Acinetobacter baylyi ADP1 |
40.678 |
100 |
0.45 |