Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | BVD86_RS16655 | Genome accession | NZ_CP018909 |
| Coordinates | 3463017..3463442 (+) | Length | 141 a.a. |
| NCBI ID | WP_101664438.1 | Uniprot ID | - |
| Organism | Acinetobacter pittii strain XJ88 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3458017..3468442
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BVD86_RS16645 (BVD86_16675) | pilY1 | 3458673..3462527 (+) | 3855 | WP_199997171.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| BVD86_RS16650 (BVD86_16680) | pilY2 | 3462538..3463020 (+) | 483 | WP_002116770.1 | type IV pilin protein | Machinery gene |
| BVD86_RS16655 (BVD86_16685) | pilE | 3463017..3463442 (+) | 426 | WP_101664438.1 | type IV pilin protein | Machinery gene |
| BVD86_RS16660 (BVD86_16690) | rpsP | 3463590..3463841 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| BVD86_RS16665 (BVD86_16695) | rimM | 3463861..3464409 (+) | 549 | WP_002116736.1 | ribosome maturation factor RimM | - |
| BVD86_RS16670 (BVD86_16700) | trmD | 3464452..3465207 (+) | 756 | WP_002116964.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| BVD86_RS16675 (BVD86_16705) | rplS | 3465427..3465795 (+) | 369 | WP_002116654.1 | 50S ribosomal protein L19 | - |
| BVD86_RS16680 (BVD86_16710) | lip | 3465847..3466788 (-) | 942 | WP_014207808.1 | lipase family alpha/beta hydrolase | - |
| BVD86_RS16685 (BVD86_16715) | - | 3466904..3467935 (-) | 1032 | WP_101664439.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15244.39 Da Isoelectric Point: 6.4441
>NTDB_id=211780 BVD86_RS16655 WP_101664438.1 3463017..3463442(+) (pilE) [Acinetobacter pittii strain XJ88]
MKNGFTLIELMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKIVHNRYPSNATITSVYGSSVSPQQG
QALYNLAFASITDSSWVLTATPIATSSQAGDGIICLNDQEQKFWAKGATDCALSATSNWLQ
MKNGFTLIELMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKIVHNRYPSNATITSVYGSSVSPQQG
QALYNLAFASITDSSWVLTATPIATSSQAGDGIICLNDQEQKFWAKGATDCALSATSNWLQ
Nucleotide
Download Length: 426 bp
>NTDB_id=211780 BVD86_RS16655 WP_101664438.1 3463017..3463442(+) (pilE) [Acinetobacter pittii strain XJ88]
ATGAAGAATGGTTTTACTTTAATAGAACTCATGATTGTAGTCGCAATAATTGCAATTTTAGCGGCTATAGCTACACCTTC
GTATTTGCAGTATTTACGCAAAGGACATCGTACAGCTGTTCAATCTGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAATAGTTCACAATCGCTATCCATCGAATGCAACGATTACATCGGTTTATGGTTCTAGTGTCAGTCCTCAACAAGGC
CAAGCCTTATATAACTTAGCTTTCGCTAGCATAACTGATTCAAGTTGGGTGTTAACTGCTACACCTATTGCTACTAGTTC
TCAAGCTGGTGATGGGATCATTTGTCTTAATGATCAAGAGCAAAAATTTTGGGCAAAAGGTGCAACTGATTGTGCGTTAT
CTGCCACATCAAATTGGCTACAGTAA
ATGAAGAATGGTTTTACTTTAATAGAACTCATGATTGTAGTCGCAATAATTGCAATTTTAGCGGCTATAGCTACACCTTC
GTATTTGCAGTATTTACGCAAAGGACATCGTACAGCTGTTCAATCTGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAATAGTTCACAATCGCTATCCATCGAATGCAACGATTACATCGGTTTATGGTTCTAGTGTCAGTCCTCAACAAGGC
CAAGCCTTATATAACTTAGCTTTCGCTAGCATAACTGATTCAAGTTGGGTGTTAACTGCTACACCTATTGCTACTAGTTC
TCAAGCTGGTGATGGGATCATTTGTCTTAATGATCAAGAGCAAAAATTTTGGGCAAAAGGTGCAACTGATTGTGCGTTAT
CTGCCACATCAAATTGGCTACAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
84.397 |
100 |
0.844 |
| comF | Acinetobacter baylyi ADP1 |
51.429 |
99.291 |
0.511 |