Detailed information NTG0211179

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: AHTJS_RS14875
• Genome accession: NZ_CP018871
• Coordinates: 3024625..3025485 (+)
• Length: 286 a.a.
• NCBI ID: WP_075316304.1
• Uniprot ID: -
• Organism: Acinetobacter haemolyticus strain TJS01
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3019625..3030485

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AHTJS_RS14855 (AHTJS_14840)	secG	3020150..3020479 (-)	330	WP_004637686.1	preprotein translocase subunit SecG	-
AHTJS_RS14860 (AHTJS_14845)	tpiA	3020492..3021283 (-)	792	WP_075316302.1	triose-phosphate isomerase	-
AHTJS_RS14865 (AHTJS_14850)	pilB	3021659..3023374 (+)	1716	WP_075316303.1	type IV-A pilus assembly ATPase PilB	Machinery gene
AHTJS_RS14870 (AHTJS_14855)	pilC	3023399..3024625 (+)	1227	WP_005083853.1	type II secretion system F family protein	Machinery gene
AHTJS_RS14875 (AHTJS_14860)	pilD	3024625..3025485 (+)	861	WP_075316304.1	prepilin peptidase	Machinery gene
AHTJS_RS14880 (AHTJS_14865)	coaE	3025487..3026092 (+)	606	WP_005088002.1	dephospho-CoA kinase	-
AHTJS_RS14885 (AHTJS_14870)	-	3026089..3027000 (-)	912	WP_075316305.1	DMT family transporter	-
AHTJS_RS14895 (AHTJS_14880)	rlmB	3027040..3027786 (-)	747	WP_004637678.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
AHTJS_RS14900 (AHTJS_14885)	-	3027895..3028221 (-)	327	WP_004637677.1	pyrimidine/purine nucleoside phosphorylase	-
AHTJS_RS14905 (AHTJS_14890)	recN	3028555..3030216 (+)	1662	WP_075316306.1	DNA repair protein RecN	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 32080.40 Da
• Isoelectric Point: 6.4294

>NTDB_id=211179 AHTJS_RS14875 WP_075316304.1 3024625..3025485(+) (pilD) [Acinetobacter haemolyticus strain TJS01]
MQQFLNYFIENPTALYLAVGLFSLCIGSFLNVVIFRTPRMMEQEWQQECQMLLHPEQPIIEEEKLTLSQPASTCPKCHTP
IRWYQNIPVISWLVLRGKCGACQNPISIRYPLIELLTMGCSLVVIAVFGPTLQMLFGLVLTWVLITLTFIDFDTQLLPDR
FTLPLAALGLAINSFAIYTTANSAIWGYVIGFLCLWIVYYLFKIFTGKEGMGYGDFKLLAALGAWMGPMLLPLIVLLSSV
VGAIIGIILLKMRGENQPFAFGPYIAIAGWIAFLWGDQIMKVYLGG

Nucleotide

• Length: 861 bp

>NTDB_id=211179 AHTJS_RS14875 WP_075316304.1 3024625..3025485(+) (pilD) [Acinetobacter haemolyticus strain TJS01]
ATGCAGCAATTCTTAAATTATTTTATCGAAAACCCAACTGCACTTTATCTAGCAGTTGGGCTTTTTAGTTTATGTATTGG
TAGCTTTCTGAATGTTGTTATTTTCCGAACGCCAAGAATGATGGAGCAGGAATGGCAACAAGAATGCCAAATGCTACTCC
ATCCAGAACAACCTATCATTGAAGAAGAAAAGCTGACTTTAAGTCAACCTGCATCAACTTGCCCTAAGTGCCACACCCCT
ATCCGCTGGTATCAAAATATCCCAGTGATCAGCTGGTTAGTACTCCGTGGTAAATGCGGTGCCTGTCAAAACCCGATTAG
TATTCGTTACCCATTGATCGAGTTATTGACCATGGGATGCTCTCTAGTGGTCATTGCTGTTTTTGGTCCTACCCTCCAAA
TGCTATTCGGTTTAGTTCTGACTTGGGTGTTAATTACCCTTACTTTTATTGATTTTGATACACAATTGCTTCCAGACCGC
TTTACTCTGCCACTGGCAGCACTCGGTTTAGCCATTAATAGCTTTGCGATCTACACCACAGCAAACTCAGCAATTTGGGG
TTATGTGATTGGTTTCCTTTGCCTTTGGATTGTTTATTATCTTTTTAAAATCTTTACTGGCAAAGAGGGTATGGGCTATG
GCGATTTTAAATTACTGGCTGCATTAGGGGCTTGGATGGGTCCAATGCTCTTGCCTTTAATTGTGTTACTTTCTTCTGTT
GTCGGTGCAATTATTGGTATCATCTTATTGAAAATGCGCGGTGAAAATCAGCCCTTTGCTTTTGGCCCCTATATTGCAAT
TGCAGGCTGGATCGCATTTTTATGGGGTGATCAAATTATGAAAGTTTATTTAGGTGGCTAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-127)

• Type IV leader peptidase family (Peptidase_A24) (138-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter nosocomialis M2	84.615	100	0.846
pilD	Acinetobacter baumannii D1279779	83.566	100	0.836
pilD	Vibrio cholerae strain A1552	55.97	93.706	0.524
pilD	Vibrio campbellii strain DS40M4	54.135	93.007	0.503
pilD	Neisseria gonorrhoeae MS11	47.253	95.455	0.451