Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AHTJS_RS00930 | Genome accession | NZ_CP018871 |
| Coordinates | 197185..197766 (+) | Length | 193 a.a. |
| NCBI ID | WP_004641476.1 | Uniprot ID | - |
| Organism | Acinetobacter haemolyticus strain TJS01 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 192185..202766
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AHTJS_RS00905 (AHTJS_00895) | - | 192576..193148 (+) | 573 | WP_075314449.1 | DUF2939 domain-containing protein | - |
| AHTJS_RS00910 (AHTJS_00900) | - | 193204..193557 (+) | 354 | WP_004641483.1 | DUF1304 domain-containing protein | - |
| AHTJS_RS00915 (AHTJS_00905) | tenA | 193709..194383 (-) | 675 | WP_075314451.1 | thiaminase II | - |
| AHTJS_RS00920 (AHTJS_00910) | - | 194555..195637 (+) | 1083 | WP_005087141.1 | DUF475 domain-containing protein | - |
| AHTJS_RS00925 (AHTJS_00915) | - | 195769..197133 (+) | 1365 | WP_035374987.1 | MFS transporter | - |
| AHTJS_RS00930 (AHTJS_00920) | ssb | 197185..197766 (+) | 582 | WP_004641476.1 | single-stranded DNA-binding protein | Machinery gene |
| AHTJS_RS00940 (AHTJS_00930) | - | 198168..199601 (+) | 1434 | WP_075314455.1 | amino acid permease | - |
| AHTJS_RS00945 (AHTJS_00935) | - | 199659..201161 (-) | 1503 | WP_075314457.1 | PLP-dependent aminotransferase family protein | - |
| AHTJS_RS00950 (AHTJS_00940) | gabT | 201316..202608 (+) | 1293 | WP_005088640.1 | 4-aminobutyrate--2-oxoglutarate transaminase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21211.89 Da Isoelectric Point: 6.7311
>NTDB_id=211151 AHTJS_RS00930 WP_004641476.1 197185..197766(+) (ssb) [Acinetobacter haemolyticus strain TJS01]
MRGVNKVILVGTLGKDPETKTFPNGGSLTQFSIATSESWTDKNTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYSTEIRGDQMQMLDSRQQSEQSGGDFNQPRFNNNQGGGYQNTGHNNNQNGYGQGGGFNGGNQGNY
AGNPQAGNGFNTPKSAPQPAATAPADLDDDLPF
MRGVNKVILVGTLGKDPETKTFPNGGSLTQFSIATSESWTDKNTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYSTEIRGDQMQMLDSRQQSEQSGGDFNQPRFNNNQGGGYQNTGHNNNQNGYGQGGGFNGGNQGNY
AGNPQAGNGFNTPKSAPQPAATAPADLDDDLPF
Nucleotide
Download Length: 582 bp
>NTDB_id=211151 AHTJS_RS00930 WP_004641476.1 197185..197766(+) (ssb) [Acinetobacter haemolyticus strain TJS01]
ATGCGTGGTGTGAATAAAGTTATTTTAGTCGGTACTTTGGGTAAAGATCCAGAAACAAAGACTTTTCCGAATGGTGGCTC
GCTAACACAGTTCTCGATTGCAACAAGTGAATCGTGGACAGATAAAAATACAGGCGAACGTAAAGAGCAAACAGAGTGGC
ATCGTATTGTATTGCATAACCGTTTAGGTGAAATTGCACAGCAATATCTTCGCAAAGGTTCTAAAGTCTATATCGAAGGT
TCACTACGTACCCGTCAATGGACTGACCAAAATGGTCAAGAGCGCTACAGCACTGAAATTCGCGGTGATCAAATGCAAAT
GCTTGATTCACGTCAGCAAAGTGAACAAAGCGGTGGTGATTTCAATCAACCACGGTTTAACAATAATCAAGGCGGTGGTT
ACCAAAACACAGGTCATAACAACAATCAAAATGGTTATGGTCAAGGTGGTGGTTTTAATGGTGGTAATCAAGGCAATTAT
GCAGGCAATCCACAAGCTGGAAATGGCTTTAATACACCAAAGTCTGCACCACAACCTGCTGCGACAGCACCTGCTGATTT
AGATGATGATTTGCCATTCTAA
ATGCGTGGTGTGAATAAAGTTATTTTAGTCGGTACTTTGGGTAAAGATCCAGAAACAAAGACTTTTCCGAATGGTGGCTC
GCTAACACAGTTCTCGATTGCAACAAGTGAATCGTGGACAGATAAAAATACAGGCGAACGTAAAGAGCAAACAGAGTGGC
ATCGTATTGTATTGCATAACCGTTTAGGTGAAATTGCACAGCAATATCTTCGCAAAGGTTCTAAAGTCTATATCGAAGGT
TCACTACGTACCCGTCAATGGACTGACCAAAATGGTCAAGAGCGCTACAGCACTGAAATTCGCGGTGATCAAATGCAAAT
GCTTGATTCACGTCAGCAAAGTGAACAAAGCGGTGGTGATTTCAATCAACCACGGTTTAACAATAATCAAGGCGGTGGTT
ACCAAAACACAGGTCATAACAACAATCAAAATGGTTATGGTCAAGGTGGTGGTTTTAATGGTGGTAATCAAGGCAATTAT
GCAGGCAATCCACAAGCTGGAAATGGCTTTAATACACCAAAGTCTGCACCACAACCTGCTGCGACAGCACCTGCTGATTT
AGATGATGATTTGCCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
53 |
100 |
0.549 |
| ssb | Vibrio cholerae strain A1552 |
44.335 |
100 |
0.466 |
| ssb | Neisseria meningitidis MC58 |
38.421 |
98.446 |
0.378 |
| ssb | Neisseria gonorrhoeae MS11 |
38.421 |
98.446 |
0.378 |