Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   BUM80_RS07175 Genome accession   NZ_CP018838
Coordinates   1318687..1319319 (-) Length   210 a.a.
NCBI ID   WP_232708152.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 11A     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1313687..1324319
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BUM80_RS07150 (BUM80_07360) recA 1314022..1315188 (-) 1167 WP_100910916.1 recombinase RecA Machinery gene
  BUM80_RS07155 (BUM80_07365) cinA 1315243..1316499 (-) 1257 WP_100910917.1 competence/damage-inducible protein A Machinery gene
  BUM80_RS07160 (BUM80_07370) brpA 1316577..1317632 (-) 1056 WP_100910918.1 biofilm formation/cell division transcriptional regulator BrpA -
  BUM80_RS07165 (BUM80_07375) - 1317640..1318158 (-) 519 WP_100910919.1 GNAT family N-acetyltransferase -
  BUM80_RS07170 (BUM80_07380) tsaE 1318148..1318591 (-) 444 WP_070528613.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  BUM80_RS07175 (BUM80_07385) comM 1318687..1319319 (-) 633 WP_232708152.1 competence protein Regulator
  BUM80_RS07180 (BUM80_07390) ndk 1319451..1319873 (-) 423 WP_100910921.1 nucleoside-diphosphate kinase -
  BUM80_RS07185 (BUM80_07395) rpoC 1319992..1323669 (-) 3678 WP_162797814.1 DNA-directed RNA polymerase subunit beta' -

Sequence

Protein


Download         Length: 210 a.a.        Molecular weight: 24316.50 Da        Isoelectric Point: 9.4599

>NTDB_id=210836 BUM80_RS07175 WP_232708152.1 1318687..1319319(-) (comM) [Streptococcus pneumoniae strain 11A]
MMERMKKQIRVLLLLTVFGLSSCSCLSLSTWSLMLNQNCFYYLVGMLLLASIGAGLNYYRGQRNQHYSVFKEDRQQFLYT
LLLLVNVLGLALIIIEYLLTGRATGEEFVEVFLPSFFFLFGIDLLVFLPIQKYVYGLKNILGKKQLCFISGLAILIVLRN
PWSILSMTFYIALGMLFLGLLVPKVIRWEVSLYSHLMRDILLVFFLLFLF

Nucleotide


Download         Length: 633 bp        

>NTDB_id=210836 BUM80_RS07175 WP_232708152.1 1318687..1319319(-) (comM) [Streptococcus pneumoniae strain 11A]
ATGATGGAAAGAATGAAAAAGCAAATTCGAGTTTTGTTATTGCTGACGGTTTTTGGACTTAGTAGCTGTTCTTGTTTAAG
TTTATCGACTTGGTCCTTGATGTTAAATCAAAACTGCTTCTATTATTTAGTGGGTATGTTGCTCCTTGCGAGTATTGGTG
CAGGGCTAAACTATTATAGAGGACAACGAAATCAACATTATTCAGTTTTTAAAGAAGATAGACAACAATTTTTGTATACT
CTGTTACTATTGGTAAATGTTTTAGGTTTAGCTTTGATTATCATAGAATATCTTCTTACGGGAAGGGCAACTGGTGAAGA
GTTTGTAGAAGTCTTTCTACCGAGTTTCTTTTTCTTATTTGGTATTGATTTGTTAGTTTTTCTGCCAATTCAGAAGTATG
TATATGGCTTGAAAAATATTTTGGGTAAAAAGCAACTCTGTTTTATTAGTGGATTAGCTATTTTAATCGTTCTCAGAAAT
CCATGGTCAATACTATCCATGACATTTTATATTGCCTTGGGCATGCTATTTCTAGGCCTGTTGGTGCCAAAAGTTATTCG
TTGGGAAGTTTCACTTTATAGCCATTTGATGAGAGATATATTATTAGTTTTCTTTTTACTGTTCCTATTTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus mitis NCTC 12261

87

95.238

0.829
  comM Streptococcus mitis SK321

84.422

94.762

0.8
  comM Streptococcus pneumoniae D39

37.561

97.619

0.367
  comM Streptococcus pneumoniae R6

37.561

97.619

0.367
  comM Streptococcus pneumoniae TIGR4

37.561

97.619

0.367

Multiple sequence alignment