Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AYP_RS15825 Genome accession   NZ_CP024124
Coordinates   3269572..3269955 (-) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   A0AA36K9J0
Organism   Acinetobacter baumannii strain AYP-A2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3264572..3274955
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AYP_RS15810 (AYP_003137) - 3266464..3268542 (-) 2079 WP_000505931.1 methyl-accepting chemotaxis protein -
  AYP_RS15815 (AYP_003138) - 3268589..3269125 (-) 537 WP_000729757.1 chemotaxis protein CheW -
  AYP_RS15820 (AYP_003139) pilH 3269186..3269548 (-) 363 WP_000101096.1 PleD family two-component system response regulator Machinery gene
  AYP_RS15825 (AYP_003140) pilG 3269572..3269955 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  AYP_RS15830 (AYP_003141) - 3270238..3270774 (+) 537 Protein_3057 hypothetical protein -
  AYP_RS15835 - 3270814..3271904 (+) 1091 WP_085940413.1 IS4-like element ISAba1 family transposase -
  AYP_RS15845 (AYP_003145) - 3272125..3273243 (+) 1119 WP_001260821.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=210582 AYP_RS15825 WP_000389061.1 3269572..3269955(-) (pilG) [Acinetobacter baumannii strain AYP-A2]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=210582 AYP_RS15825 WP_000389061.1 3269572..3269955(-) (pilG) [Acinetobacter baumannii strain AYP-A2]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTTATTGATGACTCAAAAACTATTCGCCGTACCGCAGAAACTCTATT
GCAACGCGAAGGTTGCGAAGTGATTACTGCTGTCGATGGATTTGAAGCTTTATCTAAAATTGCTGAAGCGAATCCGGATA
TTGTTTTTGTAGATATCATGATGCCTCGTTTAGACGGTTATCAAACTTGTGCTCTGATTAAGAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGCTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K9J0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment