Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | BTV20_RS07975 | Genome accession | NZ_CP018805 |
| Coordinates | 1726597..1727703 (-) | Length | 368 a.a. |
| NCBI ID | WP_075294326.1 | Uniprot ID | - |
| Organism | Histophilus somni strain USDA-ARS-USMARC-63369 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1721597..1732703
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BTV20_RS07955 (BTV20_07940) | rpsT | 1722330..1722593 (-) | 264 | WP_011608572.1 | 30S ribosomal protein S20 | - |
| BTV20_RS07960 (BTV20_07945) | murJ | 1722871..1724442 (+) | 1572 | WP_075294324.1 | murein biosynthesis integral membrane protein MurJ | - |
| BTV20_RS07965 (BTV20_07950) | ftsY | 1724605..1725948 (-) | 1344 | WP_075294325.1 | signal recognition particle-docking protein FtsY | - |
| BTV20_RS07970 (BTV20_07955) | rsmD | 1726012..1726614 (+) | 603 | WP_011608569.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| BTV20_RS07975 (BTV20_07960) | dprA | 1726597..1727703 (-) | 1107 | WP_075294326.1 | DNA-processing protein DprA | Machinery gene |
| BTV20_RS07980 (BTV20_07965) | tsaD | 1727939..1728967 (+) | 1029 | WP_011608567.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| BTV20_RS07985 (BTV20_07970) | - | 1729029..1729616 (+) | 588 | WP_011608566.1 | thymidine kinase | - |
| BTV20_RS07990 (BTV20_07975) | - | 1729777..1730448 (+) | 672 | WP_011608565.1 | trimeric intracellular cation channel family protein | - |
| BTV20_RS07995 (BTV20_07980) | proA | 1730458..1731714 (+) | 1257 | WP_011608564.1 | glutamate-5-semialdehyde dehydrogenase | - |
| BTV20_RS10170 | - | 1731776..1731850 (+) | 75 | Protein_1554 | aspartate kinase | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 41519.72 Da Isoelectric Point: 6.5011
>NTDB_id=210434 BTV20_RS07975 WP_075294326.1 1726597..1727703(-) (dprA) [Histophilus somni strain USDA-ARS-USMARC-63369]
MDKRNELLLRLLQVPKLGASGITQLLSHIDLKTLEDYDDVAFHYLGWKPEQINRWLYPDLRYIEPALFWASKKGHYLMNF
YQENYPYLLKQTIGAPPLLFIKGNPEILAQQQVAIVGSRHCSHYGEYWAKYFATELFLAGFVITSGLALGIDGFCHQAVV
DIQGQTIGVLGGGLEELYPKQHKKLAQQMLDYGGALVSEFLPHQPPKPQHFPQRNRIISGLSKGVLVVEATEKSGSLITA
RYALEQNREVFALPGQIQNEYSQGCHRLIKDGALLVENVADIVENLSPFTHYERQLTAKQIETQFPPAYKLPASPTYPEL
YAHIGYTPVGLDELSNKSGLSVDTLLIQLLELELQDLVIAEKGLYRRT
MDKRNELLLRLLQVPKLGASGITQLLSHIDLKTLEDYDDVAFHYLGWKPEQINRWLYPDLRYIEPALFWASKKGHYLMNF
YQENYPYLLKQTIGAPPLLFIKGNPEILAQQQVAIVGSRHCSHYGEYWAKYFATELFLAGFVITSGLALGIDGFCHQAVV
DIQGQTIGVLGGGLEELYPKQHKKLAQQMLDYGGALVSEFLPHQPPKPQHFPQRNRIISGLSKGVLVVEATEKSGSLITA
RYALEQNREVFALPGQIQNEYSQGCHRLIKDGALLVENVADIVENLSPFTHYERQLTAKQIETQFPPAYKLPASPTYPEL
YAHIGYTPVGLDELSNKSGLSVDTLLIQLLELELQDLVIAEKGLYRRT
Nucleotide
Download Length: 1107 bp
>NTDB_id=210434 BTV20_RS07975 WP_075294326.1 1726597..1727703(-) (dprA) [Histophilus somni strain USDA-ARS-USMARC-63369]
ATGGATAAACGGAATGAGCTGTTACTGCGTTTGTTACAAGTGCCGAAGTTGGGAGCGTCCGGAATAACTCAACTTTTATC
ACACATCGATTTAAAAACATTAGAGGATTATGATGATGTTGCGTTTCATTATTTAGGCTGGAAACCTGAACAGATAAATA
GATGGTTGTATCCGGATCTTAGATATATTGAACCTGCATTATTTTGGGCAAGCAAAAAGGGACATTATTTGATGAATTTC
TATCAAGAGAATTACCCTTATTTATTAAAGCAAACCATAGGTGCTCCCCCTTTGTTATTTATCAAAGGCAATCCGGAAAT
ACTTGCTCAACAACAAGTCGCTATTGTAGGAAGCCGTCATTGCTCACATTATGGCGAGTATTGGGCAAAGTATTTTGCAA
CGGAATTGTTCCTTGCCGGTTTTGTTATTACCAGTGGACTGGCTCTAGGGATAGACGGTTTTTGTCATCAGGCTGTTGTG
GATATTCAAGGACAAACTATCGGGGTATTAGGGGGAGGTTTGGAAGAGTTGTATCCCAAACAACATAAAAAATTAGCACA
ACAAATGCTAGATTATGGCGGTGCGTTAGTGTCAGAATTTTTACCTCATCAGCCTCCCAAACCACAACATTTTCCTCAAC
GTAATCGCATTATTAGCGGACTTTCTAAAGGTGTTTTAGTGGTTGAGGCAACAGAAAAAAGCGGTTCACTCATTACTGCA
CGTTATGCTTTAGAACAAAATAGAGAAGTTTTTGCACTTCCAGGACAAATTCAAAATGAGTATAGTCAAGGGTGTCATAG
ATTAATAAAAGACGGTGCGTTGTTAGTAGAGAATGTTGCAGATATTGTAGAAAATTTATCGCCTTTTACGCATTATGAAC
GTCAACTAACAGCAAAACAGATAGAAACGCAATTTCCGCCGGCTTATAAGTTACCTGCTTCACCGACTTATCCTGAACTC
TATGCCCATATTGGTTATACGCCGGTAGGGCTTGATGAATTATCAAATAAAAGCGGATTAAGTGTAGATACCTTATTGAT
ACAGCTGTTAGAACTTGAATTGCAAGATCTCGTTATTGCTGAAAAAGGGTTATATCGACGGACTTAA
ATGGATAAACGGAATGAGCTGTTACTGCGTTTGTTACAAGTGCCGAAGTTGGGAGCGTCCGGAATAACTCAACTTTTATC
ACACATCGATTTAAAAACATTAGAGGATTATGATGATGTTGCGTTTCATTATTTAGGCTGGAAACCTGAACAGATAAATA
GATGGTTGTATCCGGATCTTAGATATATTGAACCTGCATTATTTTGGGCAAGCAAAAAGGGACATTATTTGATGAATTTC
TATCAAGAGAATTACCCTTATTTATTAAAGCAAACCATAGGTGCTCCCCCTTTGTTATTTATCAAAGGCAATCCGGAAAT
ACTTGCTCAACAACAAGTCGCTATTGTAGGAAGCCGTCATTGCTCACATTATGGCGAGTATTGGGCAAAGTATTTTGCAA
CGGAATTGTTCCTTGCCGGTTTTGTTATTACCAGTGGACTGGCTCTAGGGATAGACGGTTTTTGTCATCAGGCTGTTGTG
GATATTCAAGGACAAACTATCGGGGTATTAGGGGGAGGTTTGGAAGAGTTGTATCCCAAACAACATAAAAAATTAGCACA
ACAAATGCTAGATTATGGCGGTGCGTTAGTGTCAGAATTTTTACCTCATCAGCCTCCCAAACCACAACATTTTCCTCAAC
GTAATCGCATTATTAGCGGACTTTCTAAAGGTGTTTTAGTGGTTGAGGCAACAGAAAAAAGCGGTTCACTCATTACTGCA
CGTTATGCTTTAGAACAAAATAGAGAAGTTTTTGCACTTCCAGGACAAATTCAAAATGAGTATAGTCAAGGGTGTCATAG
ATTAATAAAAGACGGTGCGTTGTTAGTAGAGAATGTTGCAGATATTGTAGAAAATTTATCGCCTTTTACGCATTATGAAC
GTCAACTAACAGCAAAACAGATAGAAACGCAATTTCCGCCGGCTTATAAGTTACCTGCTTCACCGACTTATCCTGAACTC
TATGCCCATATTGGTTATACGCCGGTAGGGCTTGATGAATTATCAAATAAAAGCGGATTAAGTGTAGATACCTTATTGAT
ACAGCTGTTAGAACTTGAATTGCAAGATCTCGTTATTGCTGAAAAAGGGTTATATCGACGGACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Haemophilus influenzae Rd KW20 |
61.126 |
100 |
0.62 |
| dprA | Glaesserella parasuis strain SC1401 |
50.432 |
94.293 |
0.476 |
| dprA | Vibrio cholerae strain A1552 |
44.986 |
100 |
0.451 |
| dprA | Vibrio campbellii strain DS40M4 |
41.096 |
99.185 |
0.408 |
| dprA | Legionella pneumophila strain ERS1305867 |
38.798 |
99.457 |
0.386 |